Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00422 ATGGCTGTCTTTCCTAGAAGCACCTCCTGCTTGGAATTGACTATATCTATCCCTGGCTTTGCTTCATCTCCTTCCCTATCTTCATCTGTGAAACATCTTGACATAAACCAAGTTCCTTCAGAAGAAGAGTGGATTATCGCAGCAAATGTAGAAGATGAAGAAGAAAACAGTAACGGGGGCCCTCCCCGCAAAAAACTCCGTCTCACGAAGGAACAGTCTCGCCTCCTTGAAGAAAGCTTTAGACAGAACCATACTTTAAACCCTAAGCAAAAGGAAGAATTGGCAATGCAATTGCAGCTAAAACCAAGGCAAGTTGAGGTTTGGTTTCAGAACCGTAGGGCCAGGAGCAAGCTGAAGCAAACAGAGATGGAGTGTGAGTACTTGAAGAGATGGTTTGGATCGTTGACAGAGCACAATCGAAGACTGCAAAGGGAAGTAGAGGAACTCAGAGCCATGAGAGTTGGTCCACCTACTGTGATCCCTCCTCACGGTTGTGAGCCACTCCCAGCTTCAACATTAACAATGTGCCCTAGCTGTGAGCGTGTCACGGCCACCAACGTAGACAAGGGTCCTACCAAGAACAACACCAATGTTGCATTGTCCTCTAAAGTGGTGACGCCGTCGTCGCAACCCCGTTAA 639 0.4742 MAVFPRSTSCLELTISIPGFASSPSLSSSVKHLDINQVPSEEEWIIAANVEDEEENSNGGPPRKKLRLTKEQSRLLEESFRQNHTLNPKQKEELAMQLQLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEHNRRLQREVEELRAMRVGPPTVIPPHGCEPLPASTLTMCPSCERVTATNVDKGPTKNNTNVALSSKVVTPSSQPR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00422 212 Gene3D - 55 126 - -
Pte14g00422 212 ProSitePatterns 'Homeobox' domain signature. 94 117 IPR017970 GO:0000981|GO:0006355
Pte14g00422 212 MobiDBLite consensus disorder prediction 186 212 - -
Pte14g00422 212 Coils Coil 132 152 - -
Pte14g00422 212 Pfam Homeobox associated leucine zipper 119 152 IPR003106 GO:0006355|GO:0043565
Pte14g00422 212 CDD homeodomain 62 120 IPR001356 GO:0003677
Pte14g00422 212 SUPERFAMILY Homeodomain-like 53 120 IPR009057 -
Pte14g00422 212 ProSiteProfiles 'Homeobox' domain profile. 59 119 IPR001356 GO:0003677
Pte14g00422 212 SMART halz 119 162 IPR003106 GO:0006355|GO:0043565
Pte14g00422 212 FunFam Homeobox-leucine zipper protein 18 47 124 - -
Pte14g00422 212 SMART HOX_1 61 123 IPR001356 GO:0003677
Pte14g00422 212 Pfam Homeodomain 63 117 IPR001356 GO:0003677
Pte14g00422 212 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 29 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00422 Pte-Chr14 22195541 22198243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00422 30 183 Homeobox Transcription Factor Family AT1G70920 64.557 1.79e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte14g00422 Homeodomain 6.7e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00422 14 22195541 22198243 Pte14g00422 14 22195541 22198243 RCT