Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00420 ATGGGGCAGGACTTTGGTAAAGGATCTCCTTCTTACTATGATATTCTTGGTGTAAGTTCGGATTCTTCTTCTGAACAAATAAGGCGTGCTTATCGAAAATTAGCTATGCGATGGCATCCAGATAGGTGGGCAAGAACACCTTCTTTGTCAGGTGAAGCCAAGGTTAAGTTCCAACAAATTCAAGAAGCTTATTCAGTATTATCAGATAGAAGGAAAAGGACTATGTATGATTCGGGCTTGTATAACCCTGAAGATGAAGAGGATGAGGGGTTTTCAGATTTTGTAGAAGAAATGGTTTCTCTCATGGCTGAAGTGAGGAAAGAGGACAAGGTTTACAGCAAGGAAGAGTTGCAAGCAATGTTGATGGAAATTGCTCAAGGGTTTGAATCTCCAACATGGTATTGCAGCGGGCCTTCAGTTTTTGACGAATCACCTTGTTCAAAGAAGATACGCTTAGGAACAGACAAAATGAACTATGGAGATGGTTCATATCTACAAATGTTTTGA 507 0.4024 MGQDFGKGSPSYYDILGVSSDSSSEQIRRAYRKLAMRWHPDRWARTPSLSGEAKVKFQQIQEAYSVLSDRRKRTMYDSGLYNPEDEEDEGFSDFVEEMVSLMAEVRKEDKVYSKEELQAMLMEIAQGFESPTWYCSGPSVFDESPCSKKIRLGTDKMNYGDGSYLQMF* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00420 168 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Pte14g00420 168 Pfam DnaJ domain 12 77 IPR001623 -
Pte14g00420 168 PANTHER PUTATIVE, EXPRESSED-RELATED 2 132 - -
Pte14g00420 168 PRINTS DnaJ domain signature 13 31 IPR001623 -
Pte14g00420 168 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pte14g00420 168 PRINTS DnaJ domain signature 31 46 IPR001623 -
Pte14g00420 168 CDD DnaJ 12 69 IPR001623 -
Pte14g00420 168 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pte14g00420 168 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Pte14g00420 168 Gene3D DnaJ domain 3 104 IPR036869 -
Pte14g00420 168 SMART dnaj_3 10 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00420 Pte-Chr14 22106019 22108050 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00420 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 2.23e-14 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00420 14 22106019 22108050 Pte14g00420 14 22106019 22108050 RCT