Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00108 ATGTCAGACGTAATGGATTCTGCAATAAAGTTGTTTGGGAAGACGATTGCTTTGGGACGGAAGGAAGCAGCTAACATCAATGAGTCGTCTTCAACTGCAAAAACTTGCACTTTTAATGATGATGGTGATGAGGATAACCGTGATGCTGATATTCGTTCTTGGAATTCGTCTCTAAACGAGGAGATCCCTGTGATTGGAATTGAACATGAGCAGGGAGATGAACACAAGGAGTATTCTGGGAAAGTGCTCAGCATTCATAAACAAGAAGATGATGCCTCACACCAGATAATGCAGGAACCAGAACCTCCCGCAGTAGTTTCTGATGCAAATAAGAACCCCAAAGCTACTTCGACTGATAGAGAGATTTCGTCAATTAAACCCTCTAATTCTGGAGGGCAAGGGGAAAGAGGCTCATTTCAAGAAAGAACAACGCAGAAACCTGACAAGATACTTCCATGTCCGCGTTGTTATAGCATGAATACAAAATTCTGTTATTACAACAATTATAATGTGAACCAGCCTCGTCATTTATGTAAAATATGTCAGAGGTTCTGGACTGCTGGAGGAACCTTGCGAAATGTGCCAGTTGGAGCTGGTTGTCGCAAAACCAGAAGTTCTTCGGCTTCTTCAAATTTTCGTCAGTTGATTGCTTCAGGAACTTCTCCCACAGCTCATCTTGATTTTGCAAGTGGAGTTTATAATGGTACTTTAGGCAACATTGCCACTGTCCCACCCTTTAATTCAGACGCTCCTCTTTGCAATTCCATGGCTTCTGTTTTTAACCTTGCTGAGAAAACAAATTGTGGGGAAGATCAGTCAAGCGGATCTTCTATCACAGCTTCATGTTCATCCGAAAGGAGAAGTGATTCCAGCTTGCAAGAATCAGTTGGCAGCAGCTATCATGGTTTTCCTACTCAGGTAACATGTGTCCCAAGACCTCCTTGGTCATATCCATTATTGAACAAAGGACAATGGACTTCTGCTGTGCCTACTGCATTTTGCCCACCAGTCTTTCCAGCATCTTCCCATCCTGCACCTGCATACTGGGGTTGTACTGTTCCTAGCTCTTGGAGTGCGCCATGCGTCTCTCCATCCCCTTCTTCTTTCGACCAATGCTTCTCGAGCTCTGGACTCAATTCTCCAACCTTAGGAAAACATTCAAGAGATGGGGACATACTTAATCAACCAAAATTAAAGAAAGAGTCTGCAAAAATGGATGACCATGTAGAGACTTCTGTCTTGGTTCCCAAGACACTGAGGATTGATGATCCAACTGAAGCTGCAAAGAGTTCCATATGGACAACACTGGGTATAAGGAATGACAAAGGTGGTTCAAGCCACAGTGGAGGTCTTTTCAAGGGTCTTCAATCTACCTCTAAGGACAAGAATCATGTGTCTGAACCTTCATTGTTGTTGCAAGCCAATCCTGCCGCCTTTTCCAGGTCACTGGATTTCCATGAGAGCAGTTGA 1470 0.4367 MSDVMDSAIKLFGKTIALGRKEAANINESSSTAKTCTFNDDGDEDNRDADIRSWNSSLNEEIPVIGIEHEQGDEHKEYSGKVLSIHKQEDDASHQIMQEPEPPAVVSDANKNPKATSTDREISSIKPSNSGGQGERGSFQERTTQKPDKILPCPRCYSMNTKFCYYNNYNVNQPRHLCKICQRFWTAGGTLRNVPVGAGCRKTRSSSASSNFRQLIASGTSPTAHLDFASGVYNGTLGNIATVPPFNSDAPLCNSMASVFNLAEKTNCGEDQSSGSSITASCSSERRSDSSLQESVGSSYHGFPTQVTCVPRPPWSYPLLNKGQWTSAVPTAFCPPVFPASSHPAPAYWGCTVPSSWSAPCVSPSPSSFDQCFSSSGLNSPTLGKHSRDGDILNQPKLKKESAKMDDHVETSVLVPKTLRIDDPTEAAKSSIWTTLGIRNDKGGSSHSGGLFKGLQSTSKDKNHVSEPSLLLQANPAAFSRSLDFHESS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00108 489 ProSitePatterns Zinc finger Dof-type signature. 153 189 IPR003851 GO:0003677|GO:0006355
Pte14g00108 489 ProSiteProfiles Zinc finger Dof-type profile. 151 205 IPR003851 GO:0003677|GO:0006355
Pte14g00108 489 PANTHER CYCLIC DOF FACTOR 2 5 489 IPR045174 GO:0003700|GO:0006355
Pte14g00108 489 MobiDBLite consensus disorder prediction 27 50 - -
Pte14g00108 489 Pfam Dof domain, zinc finger 148 205 IPR003851 GO:0003677|GO:0006355
Pte14g00108 489 MobiDBLite consensus disorder prediction 444 469 - -
Pte14g00108 489 MobiDBLite consensus disorder prediction 101 145 - -
Pte14g00108 489 MobiDBLite consensus disorder prediction 110 140 - -
Pte14g00108 489 MobiDBLite consensus disorder prediction 450 469 - -
Pte14g00108 489 MobiDBLite consensus disorder prediction 267 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00108 Pte-Chr14 4292096 4294885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00108 140 490 C2C2-Dof Transcription Factor Family AT5G39660 43.968 2.56e-73 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte14g00108 zf-Dof 4.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00108 - - qsu:112006803 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00108 14 4292096 4294885 Pte14g00108 14 4292096 4294885 ECH
Pte14g00108 14 4292096 4294885 Pte3g00459 3 3713640 3716648 ECH
Pte14g00108 14 4292096 4294885 Pte1g01953 1 40839789 40841904 ECH