Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01925 ATGTTCACAACCACAGATATGGTTTATGACCAAACATGGCAGCACCCCACTGAGCCATTTGCAATGATGGATAGAAGGTGGAAGCCCAGTATTGAGATTGCTCCAAATTGTCCTCGTTGTGCATCTGCCAACACCAAATTTTGTTACTACAACAACTACAGCTTGTCACAACCAAGATATTTCTGTAAGGGGTGTAGGAGGTATTGGACCAAAGGTGGTTCTCTTCGCAATGTGCCGGTTGGTGGTGGTTGCCGTAAGAGCCGCCGTGGGAGATCGGCTAGGTATGGACAAAGCCAGAGGGGCTCTGGCATGAATGGCTTTAATTCTAAGCTAGCTGGGGTTCCTAACGAAGAGTCATTGTTTGCAGAAGGAGGAAATGAAACTACTGAGATTGATCTAGCAGCTGTGTTTGCCAGGTTCTTGAACCAAAGTCCAAGTTCTGTTGAAGAATTTGATAGTGAGCCACATGGATCGTCCCCAAACTTCTCAAATTCTCTTACACCAGAGAGTGTTGAGAACGAGATCAGTGACGTCACCGCGCTTGATTGTCAGAAGCAGTCTGATCCAAACCTTCCCATGGAGTACAATTTTCCATTACAAGAGTTCCTTCCACATGAGAAGATTGATGATTTTGTGGAGTCAGATGATGGTTTATACACAATTGATCATCAGCTGCACGATTTGGTGGGTGGTAATGAATTATTCCAAGATGTTCTTTGGTCTGAGTCTGACTCCGCAGCAGCAGCAGCATGTGGAAACTTCATGTGGCAGCCATCATCAGCAATGCAGGTGTCAATTCCAAAGGTCCAATTGCAGCAAGAGATGGAGTACTCATTGCCAATGAGTCATGAAGATAATTACCAGTCACATGTTCATTCTACAGTGAGCATGTTGAATGATAATTGGGGTTCCTTCGATCTCTCGACCTTTGAGATTTTCTCAAGACCAATTAATTGA 957 0.4451 MFTTTDMVYDQTWQHPTEPFAMMDRRWKPSIEIAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRGRSARYGQSQRGSGMNGFNSKLAGVPNEESLFAEGGNETTEIDLAAVFARFLNQSPSSVEEFDSEPHGSSPNFSNSLTPESVENEISDVTALDCQKQSDPNLPMEYNFPLQEFLPHEKIDDFVESDDGLYTIDHQLHDLVGGNELFQDVLWSESDSAAAAACGNFMWQPSSAMQVSIPKVQLQQEMEYSLPMSHEDNYQSHVHSTVSMLNDNWGSFDLSTFEIFSRPIN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01925 318 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Pte13g01925 318 MobiDBLite consensus disorder prediction 147 169 - -
Pte13g01925 318 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Pte13g01925 318 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 26 174 IPR045174 GO:0003700|GO:0006355
Pte13g01925 318 MobiDBLite consensus disorder prediction 82 109 - -
Pte13g01925 318 Pfam Dof domain, zinc finger 35 89 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01925 Pte-Chr13 31988503 31989496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01925 27 145 C2C2-Dof Transcription Factor Family AT3G52440 57.724 6.38e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte13g01925 zf-Dof 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01925 - - qsa:O6P43_015057 229.95