Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01094 ATGGGTAAGAATGGAGAGGAAGAGCAGCAGCTGCCAAAATCGTCGACTTTATCGGAACCGTCGAGACTCGCCATTGGACCACCACGACCTTCGATCACGCTCCCACCTAGGACTTCCATGGAGTCGCTTTTTAACGGTGGGTCTCTTGCCGGTGCCGGGTTTAGTCCTGGACCCATGACTCTGCTTTCCAGCTTCTTCGCCGACAATGATGACTGCAAGTCTTTTTCGCAACTTCTTGCCGGAGCTATGGGGTCACCGGCAGCTGTTCCCGCCAACAGAGGTGGTCTTCCGCCTGCTTTAGAAAAAAATTCAGGTGAAGTTTCCAGTAATAGTGGATTCAAGCAGAGCCGGCCACTGGGTTTGAGTATTGCATCGTCGCCGGTTTTTACAATCCCACCTGGTTTGAGCCCTGCTGGTCTGCTTGACTCGCCTGGTTTCTTTTTGCCTGGCCAGGGACCTTTTGGAATGACGCACCAGCAAGTTCTCGCACAGGTTACTGCCCATGCTGCACAAGCCAATTCACACATTCACTTTCAAGATCAACATTCATCTGTGTCATCTGCACCAGCTAACTCATCAACACAACTTCACGATGACTCTACTTCCAACACAACCCCTCAACAGATGCCTCCCTTGATTGCTGATTCTGGAGGAGCGGTGAAAGAACCTTCCAATCACGATAACTCTGATCATCGGCAATCGTCATCTTCATTGATGGTAGACAAGCCTGCTGCTGATGGCTACAATTGGCGCAAGTACGGACAGAAGCAGGTGAAAGGTAGTGAGTTTCCACGAAGCTACTATAAATGCACGCATCTAAACTGTCCCGTGAAGAAAAAGGTTGAACGTTCTCTTGATGGCCAAGTAACAGAGATTATTTACAAGGGTCAGCACAACCATGAACCTCCTGCACCTAATAAACGTGGCAGAGATACTGGCAATGTAAATGAAGATTCAAATGTCATAGGAGAAATTCAGAGTGGAAGTATAAACAGATCGAGGGAAGGTATGGTTCCTTATTCTTTGGCTCTGAAAGAACAGGAATCTAGTCAGGCTACAGCTGAACATCTATCAGGAACAAGTGACAGTGAGGAGGTTGAAAATGCTGAACCCGTAGTGGATGAAAAAGATGATGAACCTCATCCGAAAAGGAGAAATACAGAGGTGAGGCCCTCAGACCCAGCATCTTCACATAGGACAGTCACAGAGTCCAGAATTATTGTGCAGACCACTAGCGAGGTTGATCTTCTAGATGATGGATATAGGTGGCGGAAGTATGGGCAGAAGGTTGTCAAAGGCAATCCATATCCAAGAAGCTACTACAAATGTACAAGCCAAGGATGTAATGTCCGCAAGCATGTTGAGAGGGCTTCGACAGATCCAAAGGCTGTCATAACAACATATGAAGGAAAACACAATCATGATGTGCCAGCTACCAGATATAGCAGTCACAATACTGGCAACAATGGTGCGTCTCATCTAAGACTGCAGAATTCTGGGATAGAGAAGCAAAGGTTCAATAGCAGAGATTCTGGGAATAATGATCCTCAACCCGTAGGGCGTTTAAGGCTGAAGAAAGAGCAGATAATGTAA 1593 0.4702 MGKNGEEEQQLPKSSTLSEPSRLAIGPPRPSITLPPRTSMESLFNGGSLAGAGFSPGPMTLLSSFFADNDDCKSFSQLLAGAMGSPAAVPANRGGLPPALEKNSGEVSSNSGFKQSRPLGLSIASSPVFTIPPGLSPAGLLDSPGFFLPGQGPFGMTHQQVLAQVTAHAAQANSHIHFQDQHSSVSSAPANSSTQLHDDSTSNTTPQQMPPLIADSGGAVKEPSNHDNSDHRQSSSSLMVDKPAADGYNWRKYGQKQVKGSEFPRSYYKCTHLNCPVKKKVERSLDGQVTEIIYKGQHNHEPPAPNKRGRDTGNVNEDSNVIGEIQSGSINRSREGMVPYSLALKEQESSQATAEHLSGTSDSEEVENAEPVVDEKDDEPHPKRRNTEVRPSDPASSHRTVTESRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSQGCNVRKHVERASTDPKAVITTYEGKHNHDVPATRYSSHNTGNNGASHLRLQNSGIEKQRFNSRDSGNNDPQPVGRLRLKKEQIM* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01094 530 MobiDBLite consensus disorder prediction 315 334 - -
Pte12g01094 530 SUPERFAMILY WRKY DNA-binding domain 409 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 SUPERFAMILY WRKY DNA-binding domain 243 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 MobiDBLite consensus disorder prediction 1 42 - -
Pte12g01094 530 Pfam WRKY DNA -binding domain 246 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 Pfam WRKY DNA -binding domain 418 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 ProSiteProfiles WRKY domain profile. 246 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 MobiDBLite consensus disorder prediction 374 392 - -
Pte12g01094 530 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 142 497 IPR044810 GO:0003700
Pte12g01094 530 MobiDBLite consensus disorder prediction 174 240 - -
Pte12g01094 530 FunFam WRKY transcription factor 232 304 - -
Pte12g01094 530 MobiDBLite consensus disorder prediction 473 494 - -
Pte12g01094 530 ProSiteProfiles WRKY domain profile. 412 477 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 MobiDBLite consensus disorder prediction 479 494 - -
Pte12g01094 530 Gene3D WRKY domain 402 478 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 Gene3D WRKY domain 230 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 MobiDBLite consensus disorder prediction 174 211 - -
Pte12g01094 530 MobiDBLite consensus disorder prediction 294 334 - -
Pte12g01094 530 FunFam WRKY transcription factor 33 404 470 - -
Pte12g01094 530 SMART WRKY_cls 244 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 SMART WRKY_cls 417 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte12g01094 530 MobiDBLite consensus disorder prediction 346 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01094 Pte-Chr12 28041895 28050374 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte12g01094 WRKY 1.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01094 12 28041895 28050374 Pte12g01094 12 28041895 28050374 RCT