Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g01045 ATGAAAAACATGGACAAGGCAGAGGCTAATCATCAAGGTGCAAGCAGAGGATTAGAAAATTTGTCTTTGGAAATTGGGAATTTCCCAAGAGATCTGTTACAGAGATTCAGGTCGAGTGCTAGTAATAATGACGACAACAATCACAGTAACTCACTAGAATCTCAATTTGTTGCAGACCATCATGAAGGCTCGTCAGAAGAGATTGAGCTCAGTCTTGGCCTTTCACTGGGTGGTAGATTTGGTGTAGATAAGCATGCCAAGAAGCTTATGCGATCTTCTTCTGTAGTGGGTACAACATCACTTTTGAGAGATGATGAGTCTGCAACTCCACCACCTTTTTCATACACGGCCCTTATAAGAACATCTTCGCTTCCCGCGGTGACAGAGGAGGAATGGAGAAAAAGGAAGGAGTTGCAAACTAGGAGAAGAATGGAAGCCAAGAGGAGAAGGTCTGAGAAACAGAGGAGTTCTAAGCTGGAGAGAGAAAATAGTATTGGTGGTGCCACAGGTAGCTTAGAAGACGAAAAACGCGAACTTGAAGGTCAAGTGGGGTTAAACCTGAAGCAACAAAATACGACAACAATAAGGTCAAGTGGTTCTGGGTTACCCACATGGGCTGGAGCAGCTGCTAGGCATGTGTCTGTTGGTGGTGGAGTTGATGTTTTGGTTAAAGGAATTGGGAGTGGTGGGTTTCAGAGATATGGACAACCTTGTTCTCAGGGGTCCATGGATTCTTATTGTCGGAGCTCTTCTGGGATGTTGGAGCTGGAGAGCAAGCCTTTTCAAGGAGCAAGCATTTGTGACGCTCGAAGTCCTGCTAGTAGTCAATCCTTGCCGGAGCTGAGCAATCAGGAGGCTGTCGGTTCATCAGGCTCAGAGACGATCAATAAACTGGAGGTGGCAACAAAGAAAGGAAAAGAAATCGGTACGAATGCAATGGAGGACATGCCTTGTGTTTTCACAAAAGGAGATGGTCCTAATGGAAGAAGAGTAGAAGGGATTTTATACAAATATGGCAAAGGGGAGGAGGTGAGGATAATGTGTGTATGCCATGGAAGCTTTCTTTCTCCAGCTGACTTTGTTAAACATGCTGGTGGGGTTGATGTAGCTCATCCTCAGAGACATATATTTGTGAACCCTTCTTCCACTCCCTTGTAA 1158 0.4508 MKNMDKAEANHQGASRGLENLSLEIGNFPRDLLQRFRSSASNNDDNNHSNSLESQFVADHHEGSSEEIELSLGLSLGGRFGVDKHAKKLMRSSSVVGTTSLLRDDESATPPPFSYTALIRTSSLPAVTEEEWRKRKELQTRRRMEAKRRRSEKQRSSKLERENSIGGATGSLEDEKRELEGQVGLNLKQQNTTTIRSSGSGLPTWAGAAARHVSVGGGVDVLVKGIGSGGFQRYGQPCSQGSMDSYCRSSSGMLELESKPFQGASICDARSPASSQSLPELSNQEAVGSSGSETINKLEVATKKGKEIGTNAMEDMPCVFTKGDGPNGRRVEGILYKYGKGEEVRIMCVCHGSFLSPADFVKHAGGVDVAHPQRHIFVNPSSTPL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g01045 385 PANTHER AFP HOMOLOG 2 28 382 IPR031307 GO:0007165
Pte12g01045 385 MobiDBLite consensus disorder prediction 1 20 - -
Pte12g01045 385 MobiDBLite consensus disorder prediction 268 292 - -
Pte12g01045 385 MobiDBLite consensus disorder prediction 129 175 - -
Pte12g01045 385 Pfam Tify domain binding domain 344 378 IPR032308 -
Pte12g01045 385 Coils Coil 4 24 - -
Pte12g01045 385 Pfam Putative nuclear localisation signal 118 257 IPR032310 -
Pte12g01045 385 Pfam Ethylene-responsive binding factor-associated repression 65 97 IPR012463 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g01045 Pte-Chr12 25446349 25451359 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g01045 12 25446349 25451359 Pte12g01045 12 25446349 25451359 RCT