Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00949 ATGTGCTATTATATATATTGGACTAATCAGGGTGGTATCGAGGAAGGTGAGGACCCAAGATCTGCTGCCATTAGGGAACTACAAGAAGAAACTGGAATAGTGTCCGCAGAAATTATTGCTGAGGTTCCAAAGTGGCTGACTTATGATTTTCCACCTGCTGTGAGAGCAAAAGTGAATCGACTTTGGGGAGGCGAATGGCATGGGCAGGCACAGAAGTGGTTTCTCATGCGCTTAACAGCCGATGATAGCGAGATTAATTTAGCTAATGGTAAAGCAGACTCTGAATTTGCAGAATGGAAGTGGGCAAGCCCTGAAGAAGTTATTGAGCAGGCAGTTGACTATAAGAGACCGACGTATGAGGAAGTTATGGAAACATTCAAGCCTTACTTTCAAGGAAATTCTATCTCTGCAAAATGTCAATCAGCAAAATGGTGA 435 0.4322 MCYYIYWTNQGGIEEGEDPRSAAIRELQEETGIVSAEIIAEVPKWLTYDFPPAVRAKVNRLWGGEWHGQAQKWFLMRLTADDSEINLANGKADSEFAEWKWASPEEVIEQAVDYKRPTYEEVMETFKPYFQGNSISAKCQSAKW* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00949 144 CDD Ap4A_hydrolase_plant_like 10 126 IPR022927 -
Pte12g00949 144 ProSitePatterns Nudix box signature. 11 32 IPR020084 GO:0016787
Pte12g00949 144 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 6 130 - -
Pte12g00949 144 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 10 131 - -
Pte12g00949 144 SUPERFAMILY Nudix 10 129 IPR015797 -
Pte12g00949 144 ProSiteProfiles Nudix hydrolase domain profile. 1 124 IPR000086 -
Pte12g00949 144 Pfam NUDIX domain 10 121 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00949 Pte-Chr12 13497860 13500885 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00949 12 13497860 13500885 Pte12g00949 12 13497860 13500885 RCT