Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00908 ATGGGTACGCTTCAATCGTGGAGAAAAGCATATGGGGCTCTCAAAGACTCCACTAAAGTCGGCCTTGCCCATGTCAACAGCGATTATGCGGATTTGGATGTTGCCATAGTGAAAGCTACGAACCACGTCGAGTGTCCCCCTAAAGAAAGACACCTTAGAAAAATTTTAATTGCCACTTCTGCAATTCGACCAAGAGCTGATGTTGCTTACTGCATCCATGCTCTTTCCCGAAGATTAGCCAAGACGCGTAATTGGACGGTGGCTCTGAAAACTCTTCTAGTGATTCATCGGTTGTTAAGAGAGGGTGATCCTACTTTCAGGGAAGAACTTTTGAACTTCTCCCAGAGAGGGCGCATTCTTCAACTTTCTAATTTCAAGGATGACACTAGCCCTATAGCTTGGGATTGTTCTGCATGGGTTCGCACATATGCTTTGTTTCTGGAAGAGAGACTTGAATGTTTTAGGATTCTGAAGTATGACATTGAAGCTGAGCGATTGCCTAAGCCTTCCCAAGGGCAAGAGAAGGGGTACAGCAGGACCAGAGATTTGGATAGTGAAGATTTGTTGGACCAGTTGCCTGCTTTGCAGCAGCTGCTCTTTCGTCTTATTGGTTGTCGGCCTGAAGGAGCAGCTGTCAGCAATTATGTTATACAGTATGCACTGGCACTGGTTCTGAAGGAGAGTTTTAAGATTTATTGTGCAATTAATGATGGAATCATAAATCTCGTAGATAAGTTCTTTGAGATGCCCAGACATGAAGCTATCAAAGCCCTGGATGTCTACAAACGTGCTGGACAACAGGCTGCGAGTCTTTCTGATTTCTATGAAGTCTGTAGAGGACTGGAACTTGCAAGAAATTTTCAGTTTCCCACTTTAAAAGAGCCTCCACAATCTTTTCTCACAACTATGGAGGAGTACATAAGGGAAGCCCCGCGTGTGGTTACAGTTCCAACTGAACCTCTGCTCCAGTTGACATACAGACCGGAAGAAGCTTCTTCAAGTGAAGATGTTAAAGATGAAGTGCCTGAAACTGAGCCACCAGCACATTTTGAAGATGCTGCTACTTCAATCCCTGACGTTGCTCCCCCTCCTCTTCCACCGCAAAACAACTTTGATACTGGAGATTTACTAGGTTTGAGCGATCCGACACCTGATGGGTCATCAATTGAGGAAAGAAACGCGTTGTCTCTCGCCATTGTTCCAACTGAGAATGGGACTACATCAACATTTAGTTCGAATGGCGCACAAGCAAAAAATTTTGATCCAACTGGATGGGAACTTGCGCTGGTTACCACTCCAAGCAGTAACATTTCTTCAGCTCAGGAGAGGCAACTGGCTGGTGGATTGGACTCACTCACTCTTAACAGTTTATACGATGAGGGAGCTTACAGAGCTGCACAGCAACCCGCTTATGGATCAGCTGTACCTAATCCATTTGAGGGTCCCGATCCATTTGCTTTATCAAATAGTATTCCTCCTCCTCCGTCTGTTCAAATGGCAGCAATGGCTCAACAGCAGGCCAATCCATTTGGTCCATTCCAACCTTACCAACCACAGTTGCCACAGCAACATATGATGATGAACCCTGCGAATCCATTCGGTGATGCAGGTTTTGGTGCATTTCCCACCAACCCTGTATCTCATCCACAGCATAACAATCCATTTGGTAGCTCGAGCTTGCTATGA 1686 0.4549 MGTLQSWRKAYGALKDSTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILIATSAIRPRADVAYCIHALSRRLAKTRNWTVALKTLLVIHRLLREGDPTFREELLNFSQRGRILQLSNFKDDTSPIAWDCSAWVRTYALFLEERLECFRILKYDIEAERLPKPSQGQEKGYSRTRDLDSEDLLDQLPALQQLLFRLIGCRPEGAAVSNYVIQYALALVLKESFKIYCAINDGIINLVDKFFEMPRHEAIKALDVYKRAGQQAASLSDFYEVCRGLELARNFQFPTLKEPPQSFLTTMEEYIREAPRVVTVPTEPLLQLTYRPEEASSSEDVKDEVPETEPPAHFEDAATSIPDVAPPPLPPQNNFDTGDLLGLSDPTPDGSSIEERNALSLAIVPTENGTTSTFSSNGAQAKNFDPTGWELALVTTPSSNISSAQERQLAGGLDSLTLNSLYDEGAYRAAQQPAYGSAVPNPFEGPDPFALSNSIPPPPSVQMAAMAQQQANPFGPFQPYQPQLPQQHMMMNPANPFGDAGFGAFPTNPVSHPQHNNPFGSSSLL* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00908 561 FunFam Clathrin assembly protein AP180 6 161 - -
Pte12g00908 561 MobiDBLite consensus disorder prediction 331 347 - -
Pte12g00908 561 SMART enth_2 30 161 IPR013809 -
Pte12g00908 561 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Pte12g00908 561 SUPERFAMILY GAT-like domain 178 309 - -
Pte12g00908 561 MobiDBLite consensus disorder prediction 536 561 - -
Pte12g00908 561 FunFam Putative clathrin assembly protein 173 321 - -
Pte12g00908 561 MobiDBLite consensus disorder prediction 474 503 - -
Pte12g00908 561 MobiDBLite consensus disorder prediction 328 356 - -
Pte12g00908 561 Gene3D ANTH domain 173 324 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pte12g00908 561 Gene3D - 7 161 IPR008942 -
Pte12g00908 561 CDD ANTH_N 32 154 - -
Pte12g00908 561 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Pte12g00908 561 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Pte12g00908 561 MobiDBLite consensus disorder prediction 545 561 - -
Pte12g00908 561 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 505 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00908 Pte-Chr12 12392720 12400624 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte12g00908 12 12392720 12400624 Pte12g00908 12 12392720 12400624 RCT