Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte12g00690 ATGATGTCGTCGGATAATGTTCCAGCTGCAAAGCCGGTGGCAAAAGATGAGACCCAACCCACAGGTGGCCGGAAAACAACACCGGCAAGGCCACTGGAGCAAGGCCTGAAGTGCCCCAGATGTGATTCAGCCAACACCAAGTTCTGCTACTACAACAATTACAGCCTCACGCAACCAAGACACTTCTGTAAGACATGCCGGAGGTACTGGACAAAAGGTGGGGCTTTGCGTAACGTTCCCATAGGCGGTGGCTGCCGGAAAAATAGGAAGTTCAAATCGTCTTCAAGGCTGTCAAGTGACTCTAAGGATTCAGCCTCCTCTTCTGAGTATGGTGGACTCAAGTTCTTCCATGGTTTTCCTCCTGCCATGGATTTTGAACTTGGAGGCTTGTCTTTCCCTGGGCTAAATCATCATCGTCATCATCCTTCAACAACTGACGGTGGTATCTACACCCAGTTTTCAAACTTCGGAGACCTTTCAGGTACTTCTGTTGCTATTAATACTTCTCCTTCCTGTTTTAGCCTCGGCCAGTCTGCTAGCTCAAATTCCTTGATGGGGTTTAATCATCCATTTTCGTCTCCAACTGTCGTCAATGGTGCAATTCATCAGTCCATGAGGTCAATGAATGCTCATACTAGTCTTGCTTCTTCAATTGAATCCTTGAGTTCTATAAATCAAGACTTGCACTGGAAGCTACAACGGCAACGATTAGCGATGCTTTTTGGTGGAGATAGCCAAAAAGAAACTAACAGCATTTCAACAACTCCGCAGTTTGAAAGCCAGACGCAGAGACCACAGCCTATTTTGTTTCAAAATCTCGACATGTCAAGACCTGATCAGATTAGCTCTCTTGGGAATTCGAGAAGTAAAGAAGGTCCAAGTGGGGATACAGCTACCGAATGGTTCTTTGGGAATACCTTTGCTCCAGCGACTCCGATGACGACAACAGCCAACAGTAGTGGTAATGATGGCGCCAATGATAATGCTAGCAATTGGAATGGTGCTGTTCAAGGTTGGGGTGATCCATTTGGTACTTTGCCCTAG 1044 0.4655 MMSSDNVPAAKPVAKDETQPTGGRKTTPARPLEQGLKCPRCDSANTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRKFKSSSRLSSDSKDSASSSEYGGLKFFHGFPPAMDFELGGLSFPGLNHHRHHPSTTDGGIYTQFSNFGDLSGTSVAINTSPSCFSLGQSASSNSLMGFNHPFSSPTVVNGAIHQSMRSMNAHTSLASSIESLSSINQDLHWKLQRQRLAMLFGGDSQKETNSISTTPQFESQTQRPQPILFQNLDMSRPDQISSLGNSRSKEGPSGDTATEWFFGNTFAPATPMTTTANSSGNDGANDNASNWNGAVQGWGDPFGTLP* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte12g00690 347 MobiDBLite consensus disorder prediction 278 294 - -
Pte12g00690 347 MobiDBLite consensus disorder prediction 308 335 - -
Pte12g00690 347 MobiDBLite consensus disorder prediction 278 347 - -
Pte12g00690 347 MobiDBLite consensus disorder prediction 244 265 - -
Pte12g00690 347 MobiDBLite consensus disorder prediction 1 36 - -
Pte12g00690 347 Pfam Dof domain, zinc finger 34 90 IPR003851 GO:0003677|GO:0006355
Pte12g00690 347 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 236 IPR045174 GO:0003700|GO:0006355
Pte12g00690 347 ProSiteProfiles Zinc finger Dof-type profile. 36 90 IPR003851 GO:0003677|GO:0006355
Pte12g00690 347 ProSitePatterns Zinc finger Dof-type signature. 38 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte12g00690 Pte-Chr12 6869327 6872341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte12g00690 1 341 C2C2-Dof Transcription Factor Family AT5G65590 39.489 9.36e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte12g00690 zf-Dof 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte12g00690 - - qsu:111999513 391.734