Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g01013 ATGGGTGATGAGGGAGAAAAGTCTCCATTTGATACAGGCAATATAAAAACGTTCCAAGATATGTCTAGCCATTCACTAGAAACCATGCTGGTTTGTTCAAAAGCTCATCAGGAGAGAAGGCCAAAGCCTAAACCAGAACAAGCTTCGAAATGCCCTAGATGTGATTCCACCAACACTAAATTCTGCTGCTATAACAATTACAGGAGGTACTGGACCAAAGGGGGAAGACTGAGGAACGTGTCAGTTGGTGGAGGTTGCAGGAAGAACAAGAGATCATCATTATCATGCATCCAAGAGGACCCAAGATCAACTACACACGCCAAATCCCAACCTACACAATGGCATCCTTGCATTGTCTTATTATTCTAG 369 0.4336 MGDEGEKSPFDTGNIKTFQDMSSHSLETMLVCSKAHQERRPKPKPEQASKCPRCDSTNTKFCCYNNYRRYWTKGGRLRNVSVGGGCRKNKRSSLSCIQEDPRSTTHAKSQPTQWHPCIVLLF* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g01013 122 MobiDBLite consensus disorder prediction 34 49 - -
Pte11g01013 122 Pfam Dof domain, zinc finger 47 91 IPR003851 GO:0003677|GO:0006355
Pte11g01013 122 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 108 IPR045174 GO:0003700|GO:0006355
Pte11g01013 122 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g01013 Pte-Chr11 25197172 25201041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g01013 33 106 C2C2-Dof Transcription Factor Family AT5G60200 55.056 1.54e-23 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte11g01013 zf-Dof 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g01013 - - cit:102627491 135.576