Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00149 ATGTTTCCGGTGGTACAACAAGCCTTGTGTAAACCAGGTTCCATGAATGATCGAGCACAGCAAGCCCATATTCCGAAGACTGAGCCACGCCGCTTCTGCAAGACATGCCAAGTGTATTGGGCAAGAGGAGGTGCTCTTAGAAACGTCCAGGTTGGAGGAGGTAGCCGGAGAAACAAGAAAAACAAAAGGAGTCGTTCCAAATCTCTAGTTGCCATGGATAAACATGCCATCTCCAATCATGTTGATTTCAATCAAATGAACGCTTGA 267 0.4644 MFPVVQQALCKPGSMNDRAQQAHIPKTEPRRFCKTCQVYWARGGALRNVQVGGGSRRNKKNKRSRSKSLVAMDKHAISNHVDFNQMNA* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00149 88 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 70 IPR045174 GO:0003700|GO:0006355
Pte11g00149 88 MobiDBLite consensus disorder prediction 50 73 - -
Pte11g00149 88 Pfam Dof domain, zinc finger 27 60 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00149 Pte-Chr11 1894114 1894429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00149 27 72 C2C2-Dof Transcription Factor Family AT3G55370 69.565 1.81e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte11g00149 zf-Dof 8.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00149 - - vvi:100246640 67.781