Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00100 ATGATACATGAACTGTTGGGAGGTGCAGGTCTTCTAGCAAGAGAGAGGAAAATCTCCATCAATGGAGCAGATCTAATTGCAAAATCTTGCCCTTCTATCACTTCCACTTCTCCTTCACTGACAAGTAGCAGCGCCAGCGTGACCTCCACTGCTGCTGCTACTTCATCGAATTCAGAAAGCCAAAACTTGAGGTGCCCTAGATGTGATTCTTCCAACACAAAGTTTTGTTACTACAATAACTACAACCTCACTCAGCCTCGGCACTTCTGCAAGACATGTCGCCGTTATTGGACAAAAGGTGGTGCTCTGAGGAATGTTCCAATAGGCGGAGGCTGTCGGAAAAACAAAAACGCAAATGTGTCGTCCTCGGTCGCTAAAGCAAGTGCTGTGAAGATGAAGACAGTTGTATCGGAAATAGGAAGGTCAGATCTTGCTGGGACGTTCGATCAAGACCTTCTAGTTGCATCAAGCTCAATTTTATGGGGTTCGCCACAAAATTCTCATTTGTTGCCCTTGCTGAGAGCTAGCCATAATACAAACCCTAACCCTAGTTCATTCTCAAGTACTGTGATTGCGAAGGAGGAAGGCAACATTGTAGGAACCCCCATGGATGCTGAATCATTGGTTACAAATAACTTTATGAGCGGTCGAATCTTGGGTTCAGATTTGCATGGACAACCTCCTCTTGGTTCGTGCAGCAGCTATCTTTGGAGGAACAATCAATATCAACCTCAACAGCACAATGGAACTTTGATGGCTGAACTTCCAAACGATGGATTTCAAGAACTTTATCAGAGGCTTAGATCATCATCATCCAATAACTATTGTGCTGGTGATAACTCAACTTTGTTTCAGAACAACTCGCTGATGTCTTCATCTTTCTGCGAGTCGGCACCAGTGATCACCGGAAGTGAATTGGGGTACGGGAATTCCGTGATGTCCTTCTGGTCTGATATTCCAACTGGCCACGACTAG 975 0.4503 MIHELLGGAGLLARERKISINGADLIAKSCPSITSTSPSLTSSSASVTSTAAATSSNSESQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNANVSSSVAKASAVKMKTVVSEIGRSDLAGTFDQDLLVASSSILWGSPQNSHLLPLLRASHNTNPNPSSFSSTVIAKEEGNIVGTPMDAESLVTNNFMSGRILGSDLHGQPPLGSCSSYLWRNNQYQPQQHNGTLMAELPNDGFQELYQRLRSSSSNNYCAGDNSTLFQNNSLMSSSFCESAPVITGSELGYGNSVMSFWSDIPTGHD* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00100 324 ProSitePatterns Zinc finger Dof-type signature. 65 101 IPR003851 GO:0003677|GO:0006355
Pte11g00100 324 ProSiteProfiles Zinc finger Dof-type profile. 63 117 IPR003851 GO:0003677|GO:0006355
Pte11g00100 324 Pfam Dof domain, zinc finger 61 117 IPR003851 GO:0003677|GO:0006355
Pte11g00100 324 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 53 242 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00100 Pte-Chr11 1481617 1483216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00100 40 138 C2C2-Dof Transcription Factor Family AT1G51700 54.286 6.88e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte11g00100 zf-Dof 2.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00100 - - qsu:112033100 312.383