Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte11g00099 ATGCCTTCCGACAGCACCAGCGAACCACGCCGACCAACCAAATCCCAGACATCAGGAGCGCCTCCACCAGAACAAGAACATCTCCCGTGTCCTCGTTGTGACTCTACCCATACCAAGTTTTGCTACTATAACAACTATAACTTCTCTCAGCCCCGCCACTTCTGCAAGTCTTGTCGCAGATACTGGACTCAAGGCGGCACCCTTCGCGATATCCCCGTTGGTGGTGGCAGCCGTAAAAACGCCAAACGCTCTCGTACCTCTTCCTCAGCTACTTCCGCTACCATCTCCCCACATTCCACTCACGAACACTCCTTGCCTGCCACGCCAGTGTTTATGTCTCTAACACCGAGTCCAACGGCGAGTCTATCCCTTGGTGCTGCAGTTGCCAGTGCTAGCTGTGATCCCCTTGCCAAATCCAACTTGAATGCGTGTGGCAGCTTTACTTCATTGCTCAACAACACCGCTGCACAGGCTCCCGGATTTCTTTCATTTGGTGGGTTTGGGATTGGTATAGGTCACGGCCTTGAAGAAATGGGCTTGGGAATGGGCAGAGGTATCTGGCCTTTTACTGGCACGGTCGAAGGTGACGCTAACGTCGGCAGCCATGTAGGGCCTAGTGGAGTGGGGAACGCATGGCACTTAGAGAGTGGGGAAGGTGGGTTTGTTCATGGAGATTGCTTTTCTTGGCCAGACCTAGCAATTTCAACTCCTGGTAATGGTCTCAAATGA 729 0.5295 MPSDSTSEPRRPTKSQTSGAPPPEQEHLPCPRCDSTHTKFCYYNNYNFSQPRHFCKSCRRYWTQGGTLRDIPVGGGSRKNAKRSRTSSSATSATISPHSTHEHSLPATPVFMSLTPSPTASLSLGAAVASASCDPLAKSNLNACGSFTSLLNNTAAQAPGFLSFGGFGIGIGHGLEEMGLGMGRGIWPFTGTVEGDANVGSHVGPSGVGNAWHLESGEGGFVHGDCFSWPDLAISTPGNGLK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte11g00099 242 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Pte11g00099 242 MobiDBLite consensus disorder prediction 80 103 - -
Pte11g00099 242 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Pte11g00099 242 MobiDBLite consensus disorder prediction 1 22 - -
Pte11g00099 242 MobiDBLite consensus disorder prediction 69 104 - -
Pte11g00099 242 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 154 IPR045174 GO:0003700|GO:0006355
Pte11g00099 242 MobiDBLite consensus disorder prediction 1 29 - -
Pte11g00099 242 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte11g00099 Pte-Chr11 1472477 1474360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte11g00099 1 243 C2C2-Dof Transcription Factor Family AT3G50410 48.846 5.01e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte11g00099 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte11g00099 - - qsa:O6P43_024670 269.626