Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g01453 ATGGCTTTGTTACGAAAATTGTTCTTCCGAAAGCCACCTGATGGTCTCCTTGAGATCTGTGAAAGGGTCTACGTTTTTGATTGCTGCTTCACCACTGATGCTTGGAAGGAGGAGGATTACAAAGTGTACATAGGAGGGATAATTAGTCATTTTCGAGAGCATTTGCCAGATGCTTCAATCTTGGTGTTTAATTTTGGTGAGGACGACAGGAAGAGTGTAATGGCCAATATACTGTCTAACTACGATCTCACTATCATGGACTACCCTAAGCATTATGAGGGCTGCCCATTGCTTAAAATGGAGGTTATCCACCATTTTTTGAGGTCAAGCGAGAGTTGGCTTTCACTGGGTCAAAATAATGTGCTGCTCATGCATTGTGAGCAAGGTGGTTGGCCGGTTCTATCGTTCATGCTGGCTGCGCTCTTGATTTATCATAAGCAATATAGTGGGGAGCAAAGGACCTTGGATATGGTTTACAAGCAGGCTCCACGTGAGCTTTTACACCTTCTATCACCCCTGAATCCAATTCCTTCCCAGTTGAGGTATCTGCAGTATATCTCAAGGAGGAATGTTGCCGTGGATTGGCCTCCAACAGACAGGGCACTCACATTGGACTGCGTCATTCTTAGATTCATCCCAAATTTTGACGGGGAGGGTGGTTGTCGCCCAATATTTCGAATATATGGACAGGATCCATGCCAAGCTACTGATCAGAGAGCCAAAGTTTTGTACTCGACGCCAAGAAGAAGCAAAACTGTCCGATTATATAAACAGGCAGAGTGTGAACTAATTAAAATTGATATAAATTGCCATATACGAGGAGATGTTGTGGTTGAGTGCATTAGCTTAAGTGACGACTTGGAAAGTGAGATGATGATGTTCAGAGTCATGTTCAACACAGCTTTCATTAGGTCCAATATCCTCATAGTTAATCGTGATGAAGTTGATATGTTGTGGGATGCTAAGGATCACTTCCCTAAGGATTTCAGAGCAGAGATTCTTTTGTCAGAAATGGATGCTGCTGCTTGTATCATTGCGGCTAGGAGGTCATGTTTTGAGGAGAAGGAAGGCCTTCCTATAGAAGCATTTGCCAAAGTTCAAGAAATTTTCAATAATGTTGACTGGTTGGATAATCGGACTGATATGGCTCTTAGTGTCTTGCAACAGATAAATGCATCAAATGTGGTTCATGAAAAGTTGGACACTTATTCTCCTCGTTTTTCAGAGACTAGCTCTGTAGTACAAGAAGCAAGTGCTAATAGACTTCAAGGTACAAGGAGGTTAACAGTCTCAGATGATGAAGGTAACAATTCTTTATCTGTGACTTTGGAAGTTCATGCTGTTAATACACCTAAGCGATCTTCCAGTAGTAGTCCGGGTGAAAAAGAGAGAGACCCTAGGGGTGCCAGCTCTACTCTTGAAGCACCCGGTACATCTGAAATAACTTGCCATAAAAGACCTGAAGCATCTCAGAGGACCTTGGAATCTTCTAGCACACGTAAAGATTCCCAAAATGACAACACAAAGCATCAGCCACCTGATGTTTCCATACCTAAAAATGAAGTCAACCATCCAACGAATGCATCTCCAGCTATTTCGAGTTCAACTATGTTAATATCTGATGCAACTAAAACCATGGATAGTTCTGTTTCACTTTCACCACGCACACCTCCTCCGCCACCTCATCCTCGCCCTTCACCGATCTCTGGAACTACAAAAGCTCATTATCGTTCTGCTTCAAAGCAAGGACAAACATCAGTCACTTACGAGGATAGAGTTATTCAGGATGGTTGTTCACCAACTTTAAGTTCCTCACCTGGGACTCCACCATCAAGTATCACATCCAATGAATTGCCAACTTCTCTTCCATTGCATAAACCCTCACCTCCAAGTCCACCACCACCTCCAACACCACCAAGAAAGGATACTATACCAATTAGAACGGAAGCACCTGCACCTCCTTCTTCATCTTCTCCTCCTCCAATGAAGGAGGAAATTGGTATTAAAACTGAACCTCCTCCACCCCCGCCACCTTCCTCCGTAGGGGAAAAATGTGTCAGAGTTGGACATTCCCCATCCCACCCACCACCACCTCCTCCTCCTCCTCCTCCTAAGGGTGAAACATTTTTTCCAGTCAAACATTCCCCATCCCCACCAACTTCGAAAGGAAAAATATCTAGCGGAGTCGGACATCCCCCAGCCCCATATCCTTCTGAAGAGGAAATATCTGTTAGAGTTGGACCTCCTCCGCCCCCAACACCTCCTCTTAAAGGGGAACCATCTGTTGGAGTTGGACCTCCTCCAGCCCCACCCCTACCACCTAAAGGGGAAACAGCTGATGGAGTTGGACCTCCTCCAGCCCCACCACCTCCACAGCTTCCAGGGACGTCATCTGTTGGGGTTGGACCTCCTCCTCCTCCTCCTCCTCTTCCAGGCACATCCTCTGTCGGAGCTAGACCACCCCCGCCCCCTCCTCATCCCCAAGGTGTAGCTGCAGGTGCTAAAATCTCAGCTTCTTCTCCAGCACCACCGCCTCCTCCTGGCCCCCTTGGTAAAGGTGTAAAGACAGGCAATGGTGCAGGACCTAGGTCTGGTCCACTGGGTGGTAAGGGAATTCTGTCAAAGACAATAGCTTCAAACAAAAATCAGAAAAAATTGAAGCCATTGTATTGGTTGAAACTATCAAGAGCAGTGCAGGGGAGCTTGTGGGCAGAGACACAGAAGTCAGATGATGCTTCCACGGCTCCTGAGATTGATATGTCAGAACTTGAGAGTCTCTTTGGAGCGGCACTTCCTAATGATGCCAAAAAATCAAATGCGAGACGCTCAGTTGGACCTAAATCTGAGAAAGTGCAACTGATTGAGCACAGGCGTGCATATAATTGTGAAATTATGCTTTCAAAAGTGAAAATCCCGCTGCCTAATCTGATGAGCTATGTGCTTGCCTTGGATGATGAAGCCATGGACGATGATCAAGTTGAAAATCTTATAAAGTTTTGTCCTACAAAAGAGGAAATGGAAGTTCTCAAGGGCTACACGGGAGACAAGGAGAAGTTGGGGAAATGTGAGCAGTTTTTCCTAGAATTGATGAAAGTACCACGAGTAGAATCGAAGCTGAGAGTTTTCTTATTCAAGAAACAATTTGTTACTCAGGTTTCTGATCTTAGAAAAAGCCTTAATGTGGTGAACTCTGCTGCAGATGAGATCCGCGACTCTGTCAAATTGAAAAGAATTATGCAAACGATACTTTCTCTAGGAAATGCCTTGAACCAAGGAACTGCCAGGGGTTCTGCTATTGGCTTCAGATTAGATAGTTTGCTTAAACTCACGGAGACACGTGCACGAAACAACAAGATGACTCTCATGCATTATCTGTGTAAGGTTCTTGTTGATAAACTCCCGGAAGTTCTGGATTTTTCTAAGGATCTTGAGCACTTGGAGCCTGCAGCAAAGGTGCAACTAAAATTTTTGGCAGAGGAAATGCAAGCTATAAGCAAAGGGTTGGAGAAAGTTGTACAGGAATTGTCGACCTCTGAAAATGATGGTCCTATATCAGACAATTTTAGGAAGGTAATACAAATGAGATTATATGGAAAACATACAAATTGGAATCATGCCGCTCACTTTTTGTGGAATGCAACATCCAACGGGGATTGA 3657 0.4463 MALLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWKEEDYKVYIGGIISHFREHLPDASILVFNFGEDDRKSVMANILSNYDLTIMDYPKHYEGCPLLKMEVIHHFLRSSESWLSLGQNNVLLMHCEQGGWPVLSFMLAALLIYHKQYSGEQRTLDMVYKQAPRELLHLLSPLNPIPSQLRYLQYISRRNVAVDWPPTDRALTLDCVILRFIPNFDGEGGCRPIFRIYGQDPCQATDQRAKVLYSTPRRSKTVRLYKQAECELIKIDINCHIRGDVVVECISLSDDLESEMMMFRVMFNTAFIRSNILIVNRDEVDMLWDAKDHFPKDFRAEILLSEMDAAACIIAARRSCFEEKEGLPIEAFAKVQEIFNNVDWLDNRTDMALSVLQQINASNVVHEKLDTYSPRFSETSSVVQEASANRLQGTRRLTVSDDEGNNSLSVTLEVHAVNTPKRSSSSSPGEKERDPRGASSTLEAPGTSEITCHKRPEASQRTLESSSTRKDSQNDNTKHQPPDVSIPKNEVNHPTNASPAISSSTMLISDATKTMDSSVSLSPRTPPPPPHPRPSPISGTTKAHYRSASKQGQTSVTYEDRVIQDGCSPTLSSSPGTPPSSITSNELPTSLPLHKPSPPSPPPPPTPPRKDTIPIRTEAPAPPSSSSPPPMKEEIGIKTEPPPPPPPSSVGEKCVRVGHSPSHPPPPPPPPPPKGETFFPVKHSPSPPTSKGKISSGVGHPPAPYPSEEEISVRVGPPPPPTPPLKGEPSVGVGPPPAPPLPPKGETADGVGPPPAPPPPQLPGTSSVGVGPPPPPPPLPGTSSVGARPPPPPPHPQGVAAGAKISASSPAPPPPPGPLGKGVKTGNGAGPRSGPLGGKGILSKTIASNKNQKKLKPLYWLKLSRAVQGSLWAETQKSDDASTAPEIDMSELESLFGAALPNDAKKSNARRSVGPKSEKVQLIEHRRAYNCEIMLSKVKIPLPNLMSYVLALDDEAMDDDQVENLIKFCPTKEEMEVLKGYTGDKEKLGKCEQFFLELMKVPRVESKLRVFLFKKQFVTQVSDLRKSLNVVNSAADEIRDSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLVDKLPEVLDFSKDLEHLEPAAKVQLKFLAEEMQAISKGLEKVVQELSTSENDGPISDNFRKVIQMRLYGKHTNWNHAAHFLWNATSNGD* 1219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g01453 1218 SUPERFAMILY Formin homology 2 domain (FH2 domain) 820 1200 - -
Pte10g01453 1218 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Pte10g01453 1218 Gene3D - 196 341 - -
Pte10g01453 1218 Gene3D Formin, FH2 domain 874 1215 IPR042201 -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 418 456 - -
Pte10g01453 1218 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Pte10g01453 1218 PANTHER FORMIN-J 1 680 - -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 652 681 - -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 571 622 - -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 623 642 - -
Pte10g01453 1218 ProSiteProfiles Formin homology-2 (FH2) domain profile. 876 1218 IPR015425 -
Pte10g01453 1218 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 338 IPR035892 -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 418 873 - -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 509 552 - -
Pte10g01453 1218 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Pte10g01453 1218 SMART PTEN_C2_2 197 337 IPR014020 -
Pte10g01453 1218 Pfam Formin Homology 2 Domain 880 1193 IPR015425 -
Pte10g01453 1218 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Pte10g01453 1218 SMART it6_source 876 1218 IPR015425 -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 553 567 - -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 691 709 - -
Pte10g01453 1218 MobiDBLite consensus disorder prediction 744 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g01453 Pte-Chr10 32567751 32580434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g01453 1 433 FH2 protein (formin) Gene Family AT2G25050 62.818 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g01453 - - gmx:100786096 1216.83