Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte10g00170 ATGGCTTCCGACAACGCCAGTGAACCACGACGACCATCCAAATCCCAGCACTCGGGAGCTCCTCCACCAGAACAAGAGCATTTACCATGCCCCCGCTGTGACTCTACCCACACCAAGTTCTGTTACTATAACAATTACAACTTCTCTCAGCCCCGTCACTTCTGCAAGTCTTGCCGCAGATACTGGACTCAAGGTGGCACTCTCCGCGATATCCCCATTGGTGGTGGCAGCCGTAAAAATGCGAAACGGTCTCGTACCCCCTCCTCAGCAACTTCCTCTGCCGTCGTTTCCCCACATTCCGCCCAAGAACACCATTTGCCTGTCACGCCAGTCTATATGTCTCTAGCACCTAATCCAACGGCAAGTCTACCCCTTGGTGCTGCAGTGGTTAGTGCTGGCTGTGATCCCTTTGCCAAACTCAACTTGGAATTATGTGGCAGCTTTACTTCATTGCTCAACAACACCGCTACACAGGCTCCAGAATTTCTCTCTTTTGATGGGTTCGGGATCGGTATAGGTCATGGTCTTGAAGAAATGAGCTTGGGAATGAGCAGAGATATCTTGCCTTTTGCAGGCACGGTCGCCGGGAACGTCTGGCATACAGAGAATGGCGAAGGTGGGTTCGTCAATGGAGATTGCTTTCCTTGGCCAGACTTAGCAATATCAACTCCTGGTAATGCTCTCAAATGA 690 0.5116 MASDNASEPRRPSKSQHSGAPPPEQEHLPCPRCDSTHTKFCYYNNYNFSQPRHFCKSCRRYWTQGGTLRDIPIGGGSRKNAKRSRTPSSATSSAVVSPHSAQEHHLPVTPVYMSLAPNPTASLPLGAAVVSAGCDPFAKLNLELCGSFTSLLNNTATQAPEFLSFDGFGIGIGHGLEEMSLGMSRDILPFAGTVAGNVWHTENGEGGFVNGDCFPWPDLAISTPGNALK* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte10g00170 229 MobiDBLite consensus disorder prediction 69 101 - -
Pte10g00170 229 MobiDBLite consensus disorder prediction 1 20 - -
Pte10g00170 229 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Pte10g00170 229 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Pte10g00170 229 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Pte10g00170 229 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 114 IPR045174 GO:0003700|GO:0006355
Pte10g00170 229 MobiDBLite consensus disorder prediction 81 99 - -
Pte10g00170 229 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte10g00170 Pte-Chr10 1528082 1529036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte10g00170 1 230 C2C2-Dof Transcription Factor Family AT3G50410 46.154 3.23e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte10g00170 zf-Dof 9.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte10g00170 - - qsa:O6P43_024670 277.33