Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste9g01436 GAGGAATCGAATTCAACAGCGAAGTCTCTTATGGAGAACCTGCTTGGGCTCTTGAGGGTTCGCATCAAGCGTGGCGTCAACCTTGCCATTCGCGATGTCCGCAGCAGCGACCCCTATGTTGTCATCAAGATGAATAACCAGAAGCTAAAGACACGTGTGATTAAAAAGGATGTGAATCCGGAGTGGAATGAAGACCTTACTCTTTCTATTATAAATCCCAATCAAAAAGTTAAACTGACTGTTTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGACATTGCGCCCTTTATAGAAGCCTTGAAGAGGAACATAACTGGCATACCAAATGGTACTGTAATCACCAGAATACAACCAAGCAGTCATAACTTACTGGCAGACGAGAGTTGCATAACTTATAGCAATGGAAAGGTTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAATGTGGTGAAGTGGAAATCCAATTGCAGTGGATTGATCTTCCTGGCTCTAAGGGTTTATGATCTTACGACGTGTTTGTGTATTAAAAACTTCATGCATATAAAAGCTGGCTTTTTGCCTTGTACTAAGGTCAGATTTATCTAAGACTTGTTGAGGAACAAACTGAACTTGTATTTGCATCGGGTTTGTTTTACATAGTGCAGTTTAGAACTTTTTTTTCCATGTATAAAAAACTGTCCTCTGGTCTCTGTTAGAAAGGAGTGGAGGCCCTATTTGGTCCCATGCGCTATATGAAATCTGCATGTCATTGGCACCTACGATAAATACTTCCACTCTGGATCAAACAGTTATTGCATTATCTTTATTATCATTGGATTGTAAAACATTTGTTTCACTTGGAATTTTAAGTGGTTTAAATTACATAACTAATGAAAATTGAAAGGACA 912 0.3871 MENLLGLLRVRIKRGVNLAIRDVRSSDPYVVIKMNNQKLKTRVIKKDVNPEWNEDLTLSIINPNQKVKLTVYDHDTFSKDDKMGDAEFDIAPFIEALKRNITGIPNGTVITRIQPSSHNLLADESCITYSNGKVVQDMILRLQNVECGEVEIQLQWIDLPGSKGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste9g01436 165 Pfam C2 domain 6 92 IPR000008 -
Pste9g01436 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 159 IPR035892 -
Pste9g01436 165 CDD C2_ArfGAP 5 148 - -
Pste9g01436 165 SMART C2_3c 7 102 IPR000008 -
Pste9g01436 165 Gene3D C2 domain 3 163 IPR035892 -
Pste9g01436 165 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Pste9g01436 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste9g01436 Pste-Chr9 13773524 13776208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste9g01436 38 165 C2H2 Transcription Factor Family AT1G70790 60.000 4.55e-52 161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste7g02020 7 18547041 18549455 Pste9g01436 9 13773524 13776208 ECH
Pste3g04102 3 36198115 36200146 Pste9g01436 9 13773524 13776208 ECH
Pste1g02532 1 9424485 9432935 Pste9g01436 9 13773524 13776208 ECH
Pste9g01436 9 13773524 13776208 Pste9g01436 9 13773524 13776208 ECH