Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01530 ATCGAGATGGTTCTCTCAAAAACAGCCTCACAGACAGACATATCTGTGCATTCGACCTTCGCTTCTCGCTATGTTCGCACCTCGCTTCCCAGGTTCAAGATGGCGGAGGAATCGATCCCGAAGGAAGCGGCGTACCAGATCATAAACGACGAGTTGATGTTAGACGGAAATCCGAGGCTGAATCTGGCGTCGTTTGTGACCACGTGGATGGAGCCTGAATGCGACAAACTCATCATGGCTTCCATTAACAAAAACTACGTCGACATGGATGAGTATCCTAACCGGTGTGTTAACATGATAGCTCACCTTTTCAATGCTCCACTCAAGGAGTCAGAAGCTGCAGTTGGTGTTGGCACGGTTGGCTCATCAGAGGCCATAATGTTGGCCGGATTGGCATTCAAAAGGAGATGGCAAAATAGAAGGAAACAGGAAGGGAAGCCTTATGATAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAATTGAAAGAAGTGAAGCTGCGTGACGGATACTATGTAATGGACCCTGAAAAAGCGGTGGAAATGGTGGATGAGAACACCATTTGTGTTGCCGCTATCCTTGGTTCCACTCTGAACGGGGAGTTTGAAGATGTCAAACACTTAAATAATCTCCTAGTTGAAAAGAATAAGGAAACTGGATGGGACACTCCAATTCATGTGGATGCAGCCAGTGGTGGATTCATTGCACCCTTTCTTTATCCAGAGCTTGAGTGGGACTTTCGGTTACCACTGGTGAAGAGCATCAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGTATTGGTTGGGTCATTTGGAGAAGCAAGGAAGACCTTCCTGAAGAACTCATTTTCCACATTAACTATCTAGGAGCTGATCAACCCACCTTCACCCTCAACTTCTCCAAAGGTTCTAGCCAAGTTATTGCTCAGTACTACCAACTAATTCGATTGGGTTATGAGGGATATAAGATGGTGATGGAAAACTGTAGAGACAACATGACAGTGCTTAAGGAAGGACTGGAGAAAACAGGACGGTTTGCAATTATATCCAAAGACATTGGAGTACCATTGGTGGCGTTCACTTTGAAGGACAACAACCACTTCAATGAGTTCCAAATCTCTGATATGCTGAGACGCTATGGTTGGATAGTGCCGGCATACACAATGCCACCAGATGCAGAACATGTGACAGTGCTACGTGTGGTGATTAGGGAGGACTTTTCTCGCACCCTTGCAGAGCGTCTTGTGATTGATGTGACCAAAGTGGTGCACGAGCTGGATCTGCTTCCTGCTAGGGTGATCAGCGCCAACACCATAACGGTTAATGGAGCAGAAGGTGAAGACAATGACAACAAAGTGCTGGTTGCCAAGAAGAGTGAACTAGACACACAAAGGGAAATCACTTCTGTTTGGAAGAAGTTTGTCATGGAGAAGAAGAAGATGAATGGGCAGAGCAATTCTTGTGTGACTACAACCTCTGTACTTTGTAGGCACAAGTTTTACTACACTACTACTATTGTTTTAACATATTTTGAGATTTTGATTGGTTATACTTTTATATAA 1605 0.4474 IEMVLSKTASQTDISVHSTFASRYVRTSLPRFKMAEESIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASINKNYVDMDEYPNRCVNMIAHLFNAPLKESEAAVGVGTVGSSEAIMLAGLAFKRRWQNRRKQEGKPYDNPNIVTGANVQVCWEKFARYFEVELKEVKLRDGYYVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKHLNNLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYKMVMENCRDNMTVLKEGLEKTGRFAIISKDIGVPLVAFTLKDNNHFNEFQISDMLRRYGWIVPAYTMPPDAEHVTVLRVVIREDFSRTLAERLVIDVTKVVHELDLLPARVISANTITVNGAEGEDNDNKVLVAKKSELDTQREITSVWKKFVMEKKKMNGQSNSCVTTTSVLCRHKFYYTTTIVLTYFEILIGYTFI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01530 534 FunFam Glutamate decarboxylase 3 67 - -
Pste8g01530 534 NCBIfam glutamate decarboxylase 18 440 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pste8g01530 534 Pfam Pyridoxal-dependent decarboxylase conserved domain 40 377 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste8g01530 534 Gene3D - 68 356 IPR015421 GO:0003824
Pste8g01530 534 FunFam Glutamate decarboxylase 68 356 - -
Pste8g01530 534 FunFam Glutamate decarboxylase 357 444 - -
Pste8g01530 534 Gene3D - 357 444 - -
Pste8g01530 534 PANTHER GLUTAMATE DECARBOXYLASE 3 494 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pste8g01530 534 SUPERFAMILY PLP-dependent transferases 17 440 IPR015424 -
Pste8g01530 534 Gene3D - 3 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01530 Pste-Chr8 8568990 8575798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01530 3 497 Calmodulin-binding Proteins AT5G17330 82.669 0.0 866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01530 8 8568990 8575798 Pste8g01530 8 8568990 8575798 ECH