Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01498 TATCTCTCTTATAGGCCAATTATATTTGTAGACAGGTCACTAAAGGTGTGAAAGTATAATTTTCCTCTTATCTTACCATGCTCGGTCATAATTAACTTGGTACTGAGCTGAAGGCGCAATTGTAGTCAGAGTGAGCAACGAGGGTCATGGTTTCGCTTCATCCTCTAGTGTGCCCCTTGTCAGTTTCCTCTCCATCCTCCGGTTTTCTCAGACACTCCCTATGGTCTCGCTGCTTCCGTTTCGAAAGTTGTGTCCAGGAAAGAAGAAGCGGCTTCGTAATAAAGCAGCCTTCTTTCTTCTGCAATGCTTCGTGGCAAGAGCGATTCCTTTCACTACCGTGAAAGCTATAGCTAATAGTCCGATAGGGGAGTCGCTTCAGAGGAAAATGGAGGAGAGAAAGAAATTTGCTGTAGAAAACTCGTCTAAATTCAAGGCCTTAAGCAACGAGGCCCGAAAGGAGAGCTTTTGGTATGGAGAAGATCGGCCTCGTTGGCTTGGTCCTATTTCATATGAATACCCGTCATATCTTACTGGAGAACTGCCTGGGGATTACGGCTTTGACATTGCCGGGCTTGGCAAGGATCCTGTGGCACTTCAAAAATACTTCAACTTTGAGATATTGCATGCTCGATGGGCTATGCTTGCATCTATCGGTGCTCTGATTCCTGAAATTTTAGACCTACTGGGAACCTTTCACTTTGTAGAACCTGTGTGGTGGCGTGTTGGTTATTCAAAGCTCAAGGTCAGCCTTCACTTTGCGGGAAGTCAGGGAGTGATCGTGATTGCTATTTGCCAAGCGCTCCTTATGGTTGGACCGGAATACGCTAGATATTGTGGGACTGAGGCATTGGAGCCTCTAGGAATATATCTGCCTGGTGATATAAATTATCCTGGCGGTCCTTTGTTTGATCCTCTGAATCTGTCCAACGATCCTGAAGCTTTTGAAGAGCTGAAGGTTAAAGAAATAAAAAATGGACGTTTGGCTATGGTTGCTTGGTTAGGCTTTTACGTGCAAGCAGCACTGACGGGTAAGGGTCCTGTACAGAACCTTATTGATCACATTTCCGATCCTTTCCACAACAACTTGCTGGACTCCCTCAACTTCATGAAGTAGTTATGTAATATCAGAAAGGAATTTACATCCACTCTGTTGCTCTTTTCTGCGTTTTGCTGAGGTAATTCTGAACAGAATGGTATAGCCATCGGCCAGTATTCTTCTCATTCAACGGTCAAATCTCTTTACAAAAGAATACATATAAGAACTATCGGGCACGTTACATTTTTACACTGTAATTTAACAATATATTATTATATATATTACGATAATATGGTTA 1334 0.431 MVSLLPFRKLCPGKKKRLRNKAAFFLLQCFVARAIPFTTVKAIANSPIGESLQRKMEERKKFAVENSSKFKALSNEARKESFWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGKDPVALQKYFNFEILHARWAMLASIGALIPEILDLLGTFHFVEPVWWRVGYSKLKVSLHFAGSQGVIVIAICQALLMVGPEYARYCGTEALEPLGIYLPGDINYPGGPLFDPLNLSNDPEAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNLLDSLNFMK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01498 297 FunFam Chlorophyll a-b binding protein, chloroplastic 90 293 - -
Pste8g01498 297 Pfam Chlorophyll A-B binding protein 100 266 IPR022796 -
Pste8g01498 297 Gene3D Chlorophyll a/b binding protein domain 90 292 - -
Pste8g01498 297 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 61 292 IPR001344 GO:0009765|GO:0016020
Pste8g01498 297 SUPERFAMILY Chlorophyll a-b binding protein 82 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01498 Pste-Chr8 8220403 8227489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01498 6 294 Chloroplast and Mitochondria Gene Families AT1G76570 71.477 2.09e-156 437
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01498 8 8220403 8227489 Pste8g01498 8 8220403 8227489 ECH