Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01473 TTTAATTTATTTATCTTCCTTTAAATTCATTCCTCAGATCTTAGCCAGAGTCATCCATATCCTACCCTTCACTTTCCTGAAAAAATTTGAACCTTCCCGTTACAGTTTGTGTGTTTTGGGTGGGTACTGAGCAAGTGTAGGAGCTTCTTCGCTACCTGCAACTTCAATGGCCACGGAAGAGGTTAACATGCCTCAATCACTTCCTCCATACCCAGAGATGATAGTGCAAGCAGTGGAAGCTCTGAATGAAGCAAATGGATCAAACAAGTCAGCGATATCAAAGTATATAGAAACCACATACGGTGAGTTGCCAGAAGCAAATGTTTTGGGTCATCATCTGAACAAGATGAAAGAGAGTGGAGAGCTAGTGTTAAATAAGAACAACTACATGAAACCTGACCCAAATCCCCAACCAAAGAGGGGACGTGGAAGGCCACCAAAGCCAAAGGTACCTTTGCCACCAGGCACTGTTGTGTCCCCTCCAAGGCCAAGGGGTCGTCCCCCAAAAGACCCTAATGCCCCTCCAAAGTCCCCTAAAGCCCCTGGAAGTGGAAGGCCCAGGGGTAGGCCAAAGAAGATCCCTCGATCACCCGCTGCCGTGGCACCTTCTGTCGCCGTCACCACTGGTAGGCCTAGAGGCAGACCTCCTAAGGTCAAGCCTCAGTTGACAGAAGTCAGTGTTGGATTATAGAATGTTGTCTTTCTTTGCTATCAAATGTTTTAGTCAAATGCTATGTAGAACTCTTCTCATGTGGTCCTAGACATTGTATTGATGTAATTTTTTCTTTGTAAAATTATCTAGTGGTATCTAGCTTATTATCAGCCTTTCTTGGTTTTTCTTTCTAATTCTAATTACCAAAGAGAACAGTAACTTGAGACCCAATGTCTTCTGTCTTCTCCAATTCTATCTTTTAACTTAACTTGAAACTTAGGATCGACATGTTCAATCTCATTAGTCCTCA 962 0.4335 MATEEVNMPQSLPPYPEMIVQAVEALNEANGSNKSAISKYIETTYGELPEANVLGHHLNKMKESGELVLNKNNYMKPDPNPQPKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKDPNAPPKSPKAPGSGRPRGRPKKIPRSPAAVAPSVAVTTGRPRGRPPKVKPQLTEVSVGL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01473 174 Pfam linker histone H1 and H5 family 13 71 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste8g01473 174 PANTHER HISTONE H1 11 165 - -
Pste8g01473 174 MobiDBLite consensus disorder prediction 92 126 - -
Pste8g01473 174 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 11 78 IPR005818 GO:0000786|GO:0003677|GO:0006334
Pste8g01473 174 SUPERFAMILY "Winged helix" DNA-binding domain 9 85 IPR036390 -
Pste8g01473 174 SMART AT_hook_2 84 96 IPR017956 GO:0003677
Pste8g01473 174 SMART AT_hook_2 106 118 IPR017956 GO:0003677
Pste8g01473 174 SMART AT_hook_2 129 141 IPR017956 GO:0003677
Pste8g01473 174 SMART AT_hook_2 154 166 IPR017956 GO:0003677
Pste8g01473 174 Gene3D - 8 89 IPR036388 -
Pste8g01473 174 FunFam HMG-Y-related protein A 7 87 - -
Pste8g01473 174 PRINTS AT-hook-like domain signature 127 137 IPR017956 GO:0003677
Pste8g01473 174 PRINTS AT-hook-like domain signature 84 94 IPR017956 GO:0003677
Pste8g01473 174 PRINTS AT-hook-like domain signature 104 115 IPR017956 GO:0003677
Pste8g01473 174 MobiDBLite consensus disorder prediction 64 174 - -
Pste8g01473 174 SMART h15plus2 9 73 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01473 Pste-Chr8 8036123 8037438 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01473 8 8036123 8037438 Pste8g01473 8 8036123 8037438 ECH