Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01446 ACAAATTCTAATCTCACTTGGGCATTCACCAAGCAAGAAGAAAATGGGAAAAATGATGCTTGTTTTGGGTAGCCTCATTGGATTATGTTGTTTCACAATCAGTACTACCTATGCCTTCTCACCTTCTGGATGGACCAACGCCCATGCCACTTTCTATGGGGGTAGTGATGCTTCAGGAACTATGGGGGGAGCTTGTGGGTATGGGAATCTGTATGCAACAGGTTACGGGACTAGAACTGCTGCTTTAAGTACTGCCTTATTTAATGATGGAGCTTCGTGTGGCCAGTGCTACAAAATCATATGTGATTACAAAACAGACTCCAGATGGTGCATCAAAGGAAGATCTATAACCATAACTGCCACAAATTTTGCCCTCCCAATTTTGCTCTTCCAAACAACAATGGAGGCTGGTGCAACCCACCACTCAAGCATTTTGATATGGCTCAACCCGCTTGGGAAAAGATTGGTATTTACAGAGGAGGGATCGTTCCCGGTTCCATGCAAAAAGCACGGAGGGGTAAGGTTCACTGTGAATGGGAGGGACTACTTTGAGCTTGTGTTGATCAGCAATGTGGCCGGTGCTGGATCCATCCAATCTGTGTCCATTAAAGGTTCCAAAACTGGGTGGATGGCTATGTCAAGAAATTGGGGTGCTAATTGGCAATCCAATGCTTATTTGAATGGACAATCTTTGTCCTTCAAGGTCACTACCACTGACGGAGAAATTAGATTTTTCCCAGCTATAGTTCCATCAACTTGGACTTTTGGCCAAACTTTCTCTAGCCGTGTTCAGTTCTAAGTTCATCACTCACAATAAAACACAACGGCTGAGGCGTGCTTTTTTATTTTAATAGAGCAGCCCGCCACTCCTCTTCTGGTTTTGATTATTTGGAGGACCAAACCCATTAACTCCAAGCCCATAAATTGTTATCAATAATAAAAATCACAGCATCATATCATAAGGAAGCTCAAGCGTGTAGAAATCAAATAAGCAATTTTCAAGTTTAAATTTATACTATAAATTGTTGTAACATGAATATGAATACTATAGTTGGAGTTGGGAAAATATTAATTCCCTAGATTTTTCGATGTAATGTTGTCACTCTTGTTAGATGCAAGATGCTCTTACAGCTAGCAGAGAATCTACATGTTTTTTGTTTGATTGAAGCACATGACAATGAGTTAATAAAAG 1192 0.4077 MGKMMLVLGSLIGLCCFTISTTYAFSPSGWTNAHATFYGGSDASGTMGGACGYGNLYATGYGTRTAALSTALFNDGASCGQCYKIICDYKTDSRWCIKGRSITITATNFALPILLFQTTMEAGATHHSSILIWLNPLGKRLVFTEEGSFPVPCKKHGGVRFTVNGRDYFELVLISNVAGAGSIQSVSIKGSKTGWMAMSRNWGANWQSNAYLNGQSLSFKVTTTDGEIRFFPAIVPSTWTFGQTFSSRVQF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01446 251 SUPERFAMILY Barwin-like endoglucanases 29 176 IPR036908 -
Pste8g01446 251 PANTHER EXPANSIN-A15 16 248 IPR002963 GO:0009664
Pste8g01446 251 Pfam Lytic transglycolase 65 111 IPR009009 -
Pste8g01446 251 Gene3D - 17 130 IPR036908 -
Pste8g01446 251 SUPERFAMILY PHL pollen allergen 155 247 IPR036749 -
Pste8g01446 251 PRINTS Expansin/Lol pI family signature 29 44 IPR007118 GO:0005576
Pste8g01446 251 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Pste8g01446 251 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Pste8g01446 251 PRINTS Expansin/Lol pI family signature 195 209 IPR007118 GO:0005576
Pste8g01446 251 PRINTS Expansin/Lol pI family signature 69 87 IPR007118 GO:0005576
Pste8g01446 251 FunFam Expansin 158 251 - -
Pste8g01446 251 Gene3D - 158 251 IPR036749 -
Pste8g01446 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 48 158 IPR007112 -
Pste8g01446 251 SMART dpbb_1 65 163 IPR007112 -
Pste8g01446 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 168 247 IPR007117 -
Pste8g01446 251 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Pste8g01446 251 PRINTS Expansin signature 60 74 IPR002963 GO:0009664
Pste8g01446 251 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Pste8g01446 251 PRINTS Expansin signature 157 169 IPR002963 GO:0009664
Pste8g01446 251 PRINTS Expansin signature 169 190 IPR002963 GO:0009664
Pste8g01446 251 PRINTS Expansin signature 204 225 IPR002963 GO:0009664
Pste8g01446 251 PRINTS Expansin signature 233 249 IPR002963 GO:0009664
Pste8g01446 251 Pfam Expansin C-terminal domain 159 236 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01446 Pste-Chr8 7946718 7948116 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01446 8 7946718 7948116 Pste8g01446 8 7946718 7948116 ECH