Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01375 GTTAAATATGGTGAGAGTCGCGTTCAGCGAAATTGGGAAAGGGCAGTATCGTACTTTGGATCCGGTTGTGTGCCCTAGCAATCCAACAGGCAGGAGTGGGTATTGTTATAGCTCGAGTAAGGAATAAGGAATCGGGCCCGCGCAGTGCTTGGCATATTCTTCGATAAAAGGGTTTTGTTTTGTATTTGGCGGCATCGATCTGAGTGAAGATTGAAGATTGAAGATTGAAGATTGAAGATTGAAGGGTGAAGGATGGGAGTCCCGGCTTTCTATCGATGGCTGGCGGAGAAGTATCCGATGGTTGTTGTGGACGCAATCGAAGAGGAAGCGGTGGTCATCGAAGGCGTTTCAATCCCCGTGGATACGAGCAAGAAGAACCCTAACAACATCGAATACGATAACCTCTACCTCGACATGAATGGCATAATTCACCCTTGCTTTCATCCCGAGGATAGGCCGTCTCCCACCTCCTTTGATGAGGTCTTCCAGTGCATGTTCGACTACATTGACAGGCTTTTCGTCATGGTGCGCCCTCGCAAGCTCCTCTATATGGCCATTGACGGTGTTGCGCCGAGGGCAAAGATGAACCAGCAACGGTCTAGGAGGTTTAGGTCTGCCAAAGATGCAGCTGAAGCGGCTGCTGAAGAAGCAAGGTTAAGGGAGGAGTTTGAGAAGGAGGGAAGAAAGCTTCCTCCTAAAGAAGAGTCACAGACTTTTGATTCCAATGTCATTACACCTGGAACTGAGTTTATGGCTGTTCTGTCAATTGCGCTTCAGTACTATGTGCATCTGAGGCTGAACAACGATCCTGGTTGGCAAAATATTAAGGTTATTCTTTCTGATGCAAATGTTCCTGGTGAAGGGGAGCATAAAATTATGTCCTATATCCGCCTGCAGAGAAATCTTAAAGGTTATGATCCAAACACAAGACATTGCCTATATGGTTTGGATGCTGATTTGATTATGTTGGCATTGGCTACCCATGAAATCCATTTTTCAATTCTTAGAGAGGTTGTATTTACTCCTGGCCAAGACAAATGTTTCCTCTGTGGTCAAATGGGTCATATGGCTGCAAACTGTGAAGGAAAGGCAAAAAGGAAGGCAGGAGAGTTTGATGAAAAAGCAGAGGCTATTGTGGCAAAAAAGCCCTATCAGTTCCTGAATATTTGGACTCTCAGAGAGTATCTGGAGTATGAGATGAGAATACCTAATCCTCCTTTCGAGATTGATTTTGAATGCATTGTGGATGATTTCATCTTCATGTGTTTTTTTGTCGGCAATGATTTCCTACCACATATGCCTACACTAGAGATTCGCGAGGGTGCAATTAACTTGTTGTTAGCAGTATACAAGAAGGAATTTATGGAATTGGGTGGTTATTTAACCAATGGAAGCACGATAAATTTGAACAGGGTGGAGCATTTCATTCAGGCTGTCGGATCTTATGAAGATAAAATATTCCAGAAAAGAGCTAGATTGCATCAGCGACAAACAGAAAGAATAAAACGTGAAAAGGCACAGGCAAGAAGGGGAGATGATGCAGAGCCTCAATTCCAACCAGAGTCTTTGGTTGCAGTTTCACGATTCCATGGTTCTCGTCTTGCTTCGGCTCCAACACCTTCACCATTTCAACAATCTGAGCATTATAATCCACCAGTGTCCACGTCAGTTAGAAAAGACAATAAAGAAGCCTTTGAGAGGCCTCATAAAGTTGCTAAGATATCTTCAGGAGCAACTCTTGCTGCTGCTATTGTTGAAGCTGAGAGTAATCTTGAAAATGAAGTTCAAGATAATAAAGATGAATTGAAAACAAAATTGAAGGAAATACTTCGTGAGAAATCTGATGTATTCAACTCAAAAAATGCTGAAGAGGACAAGATTAAGTTGGGAGAACCAGGTTGGAGAGAGAGGTATTATGAGGAAAAGTTTTCTGCTAAAACTCCTGAGGAACTAGAAGCAATACGAAAAGATGTTGTTTTGAAGTACACTGAAGGCCTATGTTGGGTGATGCACTATTATTATGAAGGTGTCTGTTCTTGGAATTGGTTTTATCCTTATCACTATGCCCCCTTTGCATCTGATCTCAAGGGCCTTGGTGAACTTGATATTAGCTTTAATCTGGGTAACCCATTCAAACCATTTGACCAGCTTCTAGGGGTCTTTCCTGCTGCAAGCTCTCATGCACTGCCTGAGCCATATAGGAGACTAATGACAGCTCCAGACTCACCAATAATTGATTTTTATCCTGTTGACTTTGAAGTGGACATGAATGGAAAACGCTTTGCTTGGCAGGGTATTGCTAAGTTGCCTTTTATTGATGAAGTCCGTCTTCTTGCAGAAGTTCGAAAGATTGAAAATTTGTTAACACCAGAGGAAAAGCGACGGAATTCTATGATGTTCGACTTGCTCTTTGTGAATTCTTGTCATCCTCTCTCTGCGTGCATTAGTACACTTGACAACAAGTGTAAAACTATGTCAAACAGTGATCGGGCCGTAGTGAAGGAAAAAATCAACCCCAAAGAAAGGGATACATGCAGTGCTGGAATGAATGGTTACATATCTTTGTGTGGTGGAGAACCTTGCCCTCCTATCTTTAGGTCTCCAATTGCAAGCATGGAAGATATCATGGACAATCATGTTATATGTGCAATATATAGACTCCCAGATACACATAAACACATTGCCCGACCACCACAAGGAGTTAAATTTCCTAAAAAGATTGTTACAATTGGGGATCTAAAACCTGAACGTGTTTTATGGCATGAAGATTCAGGTAGGAGACACCATGTTGAAAATGGGAGGAAAAATCCTCCAGGATCTATTTCTGGACGGGAGCTTGGAGACGCAGCACACAGACTCATTGTCAATTCCTTGCAGGCAAAGGTTGACACTAATGGTTACCGCCACCAGCCACATAATGAACCTCCTCTATCTTATCCGGGGCCAATGGCTCCTCGACATCCAGTGCCTAGGTATGGTTATGACTTGCACTCAGGATACGCCGGAATGCCACCTCCTATTTCAGCTCCCTCACTCCATGGCAGACCACAGTTTGAACCTTACAATACTCAGCAATATGGTTATAATCAATCATACCCGCCACCACCAGTGGCATACAATCCTCGTCAGCAATTAAATCCTTACGAAAGAAATGACTATCAACACCCTAGATCACATCATTATGAAAGAAATCACCATCAGGGTAATGCAAGGCATGGATATCAATCATCAGGAAATAATCAAAATGGCAGGTTTATGAATACACAAGGTGCATATGCTAGTCACCACAGCCAAAACATCCAGCCACCTAGACCCTCTCATCAGAATTGGACTCCACGAAACAACCCGAGTGGGCACAGGGAACATGGTCAGCATTCGGCAAATCAATATTCTTTATTAGATAGAAGAGGAAACAGGAATCCAATGCCACCATCTGGTTACAACCGCAAATAAATTCATTTCGTCCAGGGAAGATTCTTCCCTACGAATTAAATATTGTTGTACCATATCTTTCTTTTTTTCCCATTTAGTTGAGGTTTGAGAGTTGTACTTGCATATTCTGCTATTTTGCCCAGTCGAGACTACCCGAATACCCTACTGAATACATCAGAGTGTCAAATTATAACCCCTAGTGCTCAGGTTTGATAACATTTTTCTACTTGATAGGCTATTCAATTGATTGTCTTATTTTGACCCAAGGCTTAATTGTATATCTTCAACATATAATTGCTTATTTCTACCCATGCGCTTGGCATGAGAAATTGATCGTTATGTATTTA 3779 0.4229 MGVPAFYRWLAEKYPMVVVDAIEEEAVVIEGVSIPVDTSKKNPNNIEYDNLYLDMNGIIHPCFHPEDRPSPTSFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFRSAKDAAEAAAEEARLREEFEKEGRKLPPKEESQTFDSNVITPGTEFMAVLSIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIMLALATHEIHFSILREVVFTPGQDKCFLCGQMGHMAANCEGKAKRKAGEFDEKAEAIVAKKPYQFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLLAVYKKEFMELGGYLTNGSTINLNRVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAEPQFQPESLVAVSRFHGSRLASAPTPSPFQQSEHYNPPVSTSVRKDNKEAFERPHKVAKISSGATLAAAIVEAESNLENEVQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWRERYYEEKFSAKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFNLGNPFKPFDQLLGVFPAASSHALPEPYRRLMTAPDSPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRLLAEVRKIENLLTPEEKRRNSMMFDLLFVNSCHPLSACISTLDNKCKTMSNSDRAVVKEKINPKERDTCSAGMNGYISLCGGEPCPPIFRSPIASMEDIMDNHVICAIYRLPDTHKHIARPPQGVKFPKKIVTIGDLKPERVLWHEDSGRRHHVENGRKNPPGSISGRELGDAAHRLIVNSLQAKVDTNGYRHQPHNEPPLSYPGPMAPRHPVPRYGYDLHSGYAGMPPPISAPSLHGRPQFEPYNTQQYGYNQSYPPPPVAYNPRQQLNPYERNDYQHPRSHHYERNHHQGNARHGYQSSGNNQNGRFMNTQGAYASHHSQNIQPPRPSHQNWTPRNNPSGHREHGQHSANQYSLLDRRGNRNPMPPSGYNRK 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01375 1066 Pfam Zinc knuckle 262 276 IPR001878 GO:0003676|GO:0008270
Pste8g01375 1066 MobiDBLite consensus disorder prediction 933 947 - -
Pste8g01375 1066 CDD PIN_XRN1-2-like 51 312 - -
Pste8g01375 1066 PIRSF Exonuclease_Xrn2 1 1047 IPR017151 GO:0004534|GO:0005634|GO:0006139
Pste8g01375 1066 MobiDBLite consensus disorder prediction 413 435 - -
Pste8g01375 1066 Coils Coil 501 528 - -
Pste8g01375 1066 SUPERFAMILY Retrovirus zinc finger-like domains 258 283 IPR036875 GO:0003676|GO:0008270
Pste8g01375 1066 MobiDBLite consensus disorder prediction 842 861 - -
Pste8g01375 1066 PANTHER 5'->3' EXORIBONUCLEASE 1 1039 IPR027073 -
Pste8g01375 1066 MobiDBLite consensus disorder prediction 921 1066 - -
Pste8g01375 1066 Pfam XRN 5'-3' exonuclease N-terminus 1 253 IPR004859 GO:0003676|GO:0004527
Pste8g01375 1066 Gene3D - 1 138 - -
Pste8g01375 1066 Gene3D - 147 387 - -
Pste8g01375 1066 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Pste8g01375 1066 MobiDBLite consensus disorder prediction 413 432 - -
Pste8g01375 1066 MobiDBLite consensus disorder prediction 453 472 - -
Pste8g01375 1066 Pfam Xrn1 helical domain 325 828 IPR041412 -
Pste8g01375 1066 Coils Coil 122 142 - -
Pste8g01375 1066 MobiDBLite consensus disorder prediction 449 472 - -
Pste8g01375 1066 FunFam 5'-3' exoribonuclease 614 714 - -
Pste8g01375 1066 FunFam 5'-3' exoribonuclease 1 136 - -
Pste8g01375 1066 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
Pste8g01375 1066 MobiDBLite consensus disorder prediction 986 1051 - -
Pste8g01375 1066 Gene3D - 617 714 - -
Pste8g01375 1066 FunFam 5'-3' exoribonuclease 149 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01375 Pste-Chr8 7439306 7451609 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01375 8 7439306 7451609 Pste8g01375 8 7439306 7451609 ECH