Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01362 ATAGAAACGCGTGGGGCGAGTGAATGTTTGGACTAGGTTATTCTTCTTCTTCCCCCTCCAATCCTAACTTGTAAATTATACTCGTGTTCTGCCAAATCCAGCTTCCAAAATTGACGAGGAACAACGTATTTGGTGCTGTGAGAGGAGATACCTCCAATCGTTTTTCCATTCAGCAGGGTTTTGATACATGGCTGTGGATAATCCTGAGGATGGATTGAAGAAGTTGGAATACTTGTCGCTGGTGTCGAAGGTGTGCACCGAGTTGGAGTCCCACACCGGCACCGGTGACAAGGTTCTCGCTGAGTTCATCACCGAGTTGGGTCGATCTTCCGAGAATGTTAAGGAATTTGATGAGAAATTGAAGGAGAATGGTGCGGAGATGCCGGATTACTTTGTCCAAACGCTCCTCAAAATTATTCACGCCATTCTCCCTCCCAAGCCCAAGGATTCCAAGAAGGAGCGAGAGGCTGCCAACGGTAAGACCAAGTTCAAGGCTCTGGTCATTGCAGACGATAGGGACCGTGTCAAGGAGCTTCAGAAGGAGATAGAATCTGAGGCTAGAGAAAAGCAGAAAGAACGAGTTGGGGAAGATGATGGCTACATAGGTAGAGATAGAAGAGATAGGCGCAGAGATGGAGATGATAGAAGGGATTACAGAAGTGGGAGAGGCAGAGATGATGAAGATGATAGAAGGGATTACGGCAGAAGAGGAAGAGATAGAGACGATGAAGATGATAGAAGGGATTCCGGCAGAAGAGGAAGGGATAAATATGATAGGGATAGGGATAGAGATCGAGATCGTGATAGATACGAGAGGCGCTGGAGAGATGAATACGAAGAGGATGGGCATGGAAGGGAGAATGGAGATAGAGATGGTAATAGGAAGGTTTCACGGCATGCTTCTGGTGAACCTGAATTATATGCTGTATATAAAGGAAGAGTGTCCAGGGTAATGGAGACTGGTTGTTTTGTCCAGCTTGATGACTTTAGAGGAAAGGAGGGGTTGGTTCATGTTTCACAAATGGCCACCCGAAGAATCATTAATGCCAAGGATGTGGTCAAAAGGGATCAGGAGGTGTATGTAAAGGTGATCTCAGTTTCGGGTCAGAAGTTGTCACTTTCCATGAGGGACGTTGATCAACATACTGGCAAGGATCTTCTTCCATTGAAGAAGAGTTCTGAGGACGAGGCTCTGAGGATGAATCCGCAGGATTCAAAGGATGGGTGGGTTGCCAGGACAGGTCTTTCGGGTATAAGGATTGTGGAAGAAGATGATGTTGGTTCTTCACGGAGACCTTTGAAGAGAATGAGCTCTCCGGAGAGATGGGAAGCGAAACAGTTAATTGCTTCAGGTGTCTTGAGTGTTTCAGAGTATCCAACTTATGATGAGGAGGGAGATGGATTGCTGTACCAGGAGGAAAGTGCTGAGGAGGAGCTTGAGATTGAGTTGAATGAGGATGAACCTGCGTTCTTGCAAGGGCAGAGCAGATACTCAATGGATATGTCCCCGGTTAAGATTTTTAAGAATCCAGAAGGTTCTCTGGGTCGAGCTGCTGCACTCCAATCTGCACTTATAAAGGAACGGAGGGAAGTGCGAGAACAACAGCAACGAACTATGCTTGATTCTATTCCAAAGGATCTCAATCGGCCATGGGAAGACCCTATGCCAGAGTCAGGCGAAAGACATCTTGCTCAGGAGCTGAGGGGTGTTGGTTTATCAGCCTATGATATGCCAGAATGGAAGAAGGATGCCTATGGGAAAACCATCACCTTTGGCCAAAGGTCAAAGCTTTCTATTCAGGAGCAGAGACAGAGTTTGCCAATTTATAAGTTAAAAAAAGAATTGATTCAGGCTGTGCATGATAATCAGGTGTTGGTGGTTATTGGAGAAACTGGTTCAGGTAAGACCACTCAGGTCACGCAGTATCTTGCTGAAGCAGGTTACACCACGAAAGGCAAAATTGGATGTACTCAACCCCGTAGAGTGGCTGCAATGTCAGTTGCAAAGAGAGTTGCTGAAGAGTTTGGTTGTCGATTGGGAGAGGAAGTTGGTTATGCCATTCGGTTTGAGGATTGCACGGGACCAGACACTGTTATCAAGTACATGACAGATGGTATGCTTCTTAGGGAAATATTGGTTGATGAGAATTTGTCACAGTATTCAGTTATAATGCTTGATGAAGCCCACGAAAGAACTATTCATACTGATGTTCTTTTTGGACTGCTGAAACAGCTAGTGAAGCGTAGACCTGAATTGCGATTGATTGTCACATCTGCTACTCTGGATGCCGAGAAATTTTCAGGATATTTCTTCAACTGTAACATCTTTACTATTCCTGGTAGAACTTTCCCTGTAGAGATTCTTTATACTAAACAACCTGAAAGTGATTATTTAGATGCTGCTTTGATCACTGTCTTACATATCCACTTGACTGAGCCTGAGGGAGACGTTCTTCTTTTCTTGACTGGTCAAGAAGAGATTGATTTTGCTTGCCAATCTCTCTATGAAAGAATGAAGGGATTAGGTAAGAATGTTCCAGAGCTGATCATTTTACCGGTTTATAGTGCCCTTCCTAGTGAAATGCAGTCTAGAATATTTGAACCTGCTCCTCCTGGGAAAAGGAAAGTGGTTGTGGCTACTAACATTGCTGAGGCCTCTTTGACTATTGATGGTATATTTTATGTAATTGATCCTGGATTTGCTAAGCAAAATGTTTATAACCCAAAGCAAGGACTTGATTCATTGGTGATAACTCCAATTTCACAAGCATCAGCCAAACAAAGAGCTGGACGTGCAGGGCGTACTGGACCTGGGAAGTGCTATCGCCTCTATACTGAGAGTGCATATAGGAATGAGATGTCTCCCACTACCATTCCTGAGATTCAAAGGATAAATCTGGGGATGATTACTCTCAATATGAAAGCTATGGGGATAAATGATCTACTGTCCTTTGATTTCATGGATCCACCATCACCCCAAGCATTGATTTCTGCTATGGAGCAGCTTTACAGTCTAGGAGCATTGGATGAAGAGGGCCTTTTAACCAAATTAGGGAGGAAAATGGCAGAATTTCCTTTGGATCCACCGTTGTCCAAGATGTTGCTTGCCAGTGTGGACCTTGGATGTAGTGATGAGATTTTGACCATAATTGCTATGATCCAGACTGGCAATATTTTTTACAGACCAAGGGAAAAGCAAGCACAAGCAGATCAGAAGAGGGCAAAGTTTTTCCAGCCAGAAGGTGACCATCTTACACTACTTGCTGTGTATGAGGCTTGGAAAGCCAAGAATTTTTCTGGGCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGATCCTTGAGAAGAGCACAGGATGTCAGGAAACAGCTTCTCACCATCATGGATAAGTACAAATTGGATGTAGTAAGTGCTGGAAAAAACTTCACCAAAGTGAGGAAGGCTATCACCGCGGGATTCTTTTTCCATGCTGCTCGAAAGGACCCCCAGGAAGGTTACCGAACCCTTGTTGAGAACCAGCCTGTGTATATCCATCCAAGTTCAGCTTTGTTCCAGAGACAGCCAGACTGGGTCATCTACCATGAGCTTGTAATGACAACTAAGGAATATATGCGTGAGGTCACTGTCATAGATCCCAAATGGCTTGTTGAGTTGGCTCCAAGATTTTTCAAAGTGGCAGATCCTACAAAGATGAGCAAGCGAAAGCGTCAGGAACGAATTGAACCACTTTATGATAGATACCACGAGCCAAATTCATGGCGATTGAGTAAACGCCGTGCATGATATATAGAACTGCCAAGTCTTCTATGGTCAAGACCTTGTTACTTAAAATTATCGATGTGTACCTCTACAGTGGAATTTGGAGCTTGGATGAATAGATTAAGTTTTATCGATATCTATCTTGTGCATCCAAAGTTCTGGTTCTGTTGAAAATAAGGAAGTGAAGATATTCCTGAACAAGAATCCGTCTGCAGAATTTGTTTGCTTGAATTGGGAGAAAGATACTGATACCCTTAAAATGGAGTGCAGCAACAAAGGTGGACTTGCACTGGCGCATCAAGAATGTGCAGTTAAATGATTAACATTAAAGGCATCAGATCATATGATGTGTGCAAACAATTAGAACTATCGTGTCAGTCATGATCTGTTTGTATAACTGGCTCCTGGCTGCCCATTTGATATATTATTAGGAGCCTTGGTGTTACTAATTGGAGGATCAGTATTGGTTAGTTCTTATTACTAGTTACCTACTGATTACAAGTGTCAGTTTTATTACTAGTTACCTACTGATTACAAGTGTCAGTTTTATTGAAAGGTTGCGGGAGGCACATTTTGAAAGAAGGCCAAGTTCAAAACATGAGCTGTATTTTCATACTTTTGTTTATTTTGATAGAGCAGAACTGACACGAGTAGTGCCTTTGTTTGTAGGCCATGAAAGGATGAGACCAACAATTGTAGTATTAAGTTGGATGCTTACGACTAAGGCATTGATATGTTGAAAAATAGAGTAGCATGAATTCTATGCTGAATTGGTTTTATAAAAAATTC 4546 0.4309 MAVDNPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVKEFDEKLKENGAEMPDYFVQTLLKIIHAILPPKPKDSKKEREAANGKTKFKALVIADDRDRVKELQKEIESEAREKQKERVGEDDGYIGRDRRDRRRDGDDRRDYRSGRGRDDEDDRRDYGRRGRDRDDEDDRRDSGRRGRDKYDRDRDRDRDRDRYERRWRDEYEEDGHGRENGDRDGNRKVSRHASGEPELYAVYKGRVSRVMETGCFVQLDDFRGKEGLVHVSQMATRRIINAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDEALRMNPQDSKDGWVARTGLSGIRIVEEDDVGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDEEGDGLLYQEESAEEELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLHIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGMITLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKVRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01362 1197 Coils Coil 455 475 - -
Pste8g01362 1197 MobiDBLite consensus disorder prediction 119 200 - -
Pste8g01362 1197 FunFam ATP-dependent RNA helicase DHX8 240 325 - -
Pste8g01362 1197 SMART ultradead3 542 726 IPR014001 -
Pste8g01362 1197 SMART helicmild6 770 874 IPR001650 -
Pste8g01362 1197 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 919 1018 - -
Pste8g01362 1197 Gene3D - 919 1018 - -
Pste8g01362 1197 Gene3D - 720 894 IPR027417 -
Pste8g01362 1197 CDD DEXHc_DHX8 539 717 IPR044762 GO:0000398|GO:0003724|GO:0005524
Pste8g01362 1197 SUPERFAMILY Nucleic acid-binding proteins 244 317 IPR012340 -
Pste8g01362 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 534 1067 IPR027417 -
Pste8g01362 1197 SMART ha2_5 935 1025 IPR007502 GO:0004386
Pste8g01362 1197 CDD S1_DHX8_helicase 245 321 - -
Pste8g01362 1197 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 659 668 IPR002464 -
Pste8g01362 1197 Gene3D - 516 719 IPR027417 -
Pste8g01362 1197 Pfam S1 RNA binding domain 245 312 IPR003029 GO:0003676
Pste8g01362 1197 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 740 915 IPR001650 -
Pste8g01362 1197 Gene3D - 240 325 IPR012340 -
Pste8g01362 1197 CDD GH2-like_DHX8 13 80 - -
Pste8g01362 1197 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 720 894 - -
Pste8g01362 1197 Pfam Helicase associated domain (HA2) 936 1024 IPR007502 GO:0004386
Pste8g01362 1197 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 510 719 - -
Pste8g01362 1197 PANTHER ATP-DEPENDENT RNA HELICASE 475 1159 - -
Pste8g01362 1197 Pfam Helicase conserved C-terminal domain 742 874 IPR001650 -
Pste8g01362 1197 CDD SF2_C_RHA 721 882 - -
Pste8g01362 1197 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1082 1157 IPR011709 -
Pste8g01362 1197 MobiDBLite consensus disorder prediction 82 101 - -
Pste8g01362 1197 SMART S1_6 243 314 IPR022967 -
Pste8g01362 1197 Coils Coil 106 133 - -
Pste8g01362 1197 MobiDBLite consensus disorder prediction 81 101 - -
Pste8g01362 1197 Pfam DEAD/DEAH box helicase 550 700 IPR011545 GO:0003676|GO:0005524
Pste8g01362 1197 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 554 717 IPR014001 -
Pste8g01362 1197 ProSiteProfiles S1 domain profile. 245 314 IPR003029 GO:0003676
Pste8g01362 1197 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01362 Pste-Chr8 7292526 7299664 Dispersed/Transposed