Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01360 AGCTGACACGCGCAGGGCATTTATTTGATTGAGCAGGGATTAGAGAAGAAGTAAGAATTACATTTACTACTGTACCTAGTCAATTACTACCATGGTCATCTTCATCGGCGAAACACTCTCCGACATTTGAGCCTCTCATGTTTTTTCTCTGGAAACCTCTTCCGCACCACCGTGGATTTTTGCTGCTTCTGTAACACAAAGCAAAACACAGAGTCTCAGTCTGCTTCTAATATAGTTTACGCTCCTCCTTTTCCTTGTCCTCGTGCTGGTTACAAGATAGGGTTTGCGCCACTGCCCATGACCAGGAGCTAGAAAGGAGGTTATGGAAGGTGCTGGTCAAAATAACATGAATCGAAATAGTTGTGTGTTTGGTTCATCATCGGGAGCAACTCTCAGGCCCCCAAATCGATTGAATAATGCTGTGCCTAATAATCAAGTGGGTGTTGCCGAGAATCAGAAACCCTATGGTATACCACCCTCTCACCCCAATACAAATATTTCACCTTCATCACCTTATCCTCAATTTTTTGCCTCCCAATCCAATTCGGTTTCGCAGCATTCCAGGTCTTTGTCTCAGCCCTCTTTTTTCTCTCTGGATTCCTTGCCCCCATTGAGTCCTTCCCCTTATAAAGAACCCTCTTTTTCTGACTCAATTTCCACCGATGTGTATGCTGAGGAAAGCTTGGTTACTTCTCATGCCCCTTTACCTAACCGTGGTCACGCCCTTCAGCTTGGCCATTCTCTTCCCCCGCGTAAAGGGCATAGGCGTTCTAGCAGTGATTCCCCTTTGGGAATCTCTGATTTTATTCAGTCTGCCCCCCCGTTGGTTCCCTCCAGGACTTGGTTTGATCGTGGCAATTCGGCTTCTAAGGGAAGGAACCCTGGTTTTGAGAAACCAATTCAGTTGGTCTTAAAGGAACCGATTAAGGATATGGACTGTGTTGATGTTGATGGTTTTGGTGGAGAACCTATGGTTGGAAGGAAAGAGGATGATGCACTGGATGATTTGTTTAGTGCATATATGAATTTGGACAATATTGATGGTCTGGATTTTTCTGGTATGGAGGATAAGGATTTGGATAGCAGAACTAGTGGTTCCAAGACAGTTGAGAGCAGTGATAATGAAGTTGAGAGTCATGCAAATGAAAAAGTGACTGGCGCTCAAGGAGCTAGTTCAAGCTGTTCTGAAGAGAGGAGGGAAGGAGTGAAGAGGAGTTCTAACGGAAACATTGCACCTGGTTCCCGCCACCGGAGAAGTTTCTCATTGGACAGCTCCATAGGAAGTTTTCATATTGGAGATGAATTGCCTGGGCTTCCTCCTTTGCAAAACCGAGTTGGTCAACACTCACCTAGCAGTTCGATAGATGGTAAAACTTCTGAAACAAACATCAAGTTTGGAAACGGTGAATTCAGCTCAGAGGAGCTAAAGAAAATAAAGGAAAATGATAAACTTGCTGAAATTGCCATGGCCGATCCTAAGCGTGCAAAAAGGATTTTGGCTAATCGTCTATCAGCTGCCCGCTCAAAAGAGCGGAAGATGCGTTACATTTCTGAATTAGAGCTCAAAGTCCAAACACTTCAGACAGAAACAACCACATTGTCTACTCAGTTTACCAAATTACAGATGGATAATTCAGAGCTTAAAAGTGAGAATAATGAGTACAAATTGAGGATTCAAGCCTTGGAACAGCAGTCCCAACTGAAAGATGCCCTGAATGAGACCTTGGATGCTGAAGTGCGGCGTTTAAGACGCACAGTTGCAGAACTTGGTGGAGAGTCCCTTCTCTCAAGTCGCATGGCTCAACAGCTTGCTATTAGCCAACAAATGTTCCAGTTACAGCACCAGCAGCACCCTAGCCAGCTTAGACATGGCCAGCTACACAATAGCCATTCCCAGGAACAGACACAGACTCAGTCACAGCGCCACAATGGCAAAGCTACTGCCTGCTGATCGCATTGATTGTACATAGGCACTCTACTACCATGTATACTCAGTGTGATACGAATCAGAATGCCCATCAACAAAAGAGAAAATTCAAAAGACTAAGGAGGCAAAAGGAGCCAATGTGAAGGGAACTCTTATCTAATAAGGTTATAGTTCTTCTGCTTGTGCAATCCCCAAGGATATTATATATGAATACTCGGAATAAAGTGTATAATGGTTTATTTTATTGCATAAGATTTTTAGTTATTATTTGTAAATTTAATGATGATTGATTTTA 2222 0.4347 MEGAGQNNMNRNSCVFGSSSGATLRPPNRLNNAVPNNQVGVAENQKPYGIPPSHPNTNISPSSPYPQFFASQSNSVSQHSRSLSQPSFFSLDSLPPLSPSPYKEPSFSDSISTDVYAEESLVTSHAPLPNRGHALQLGHSLPPRKGHRRSSSDSPLGISDFIQSAPPLVPSRTWFDRGNSASKGRNPGFEKPIQLVLKEPIKDMDCVDVDGFGGEPMVGRKEDDALDDLFSAYMNLDNIDGLDFSGMEDKDLDSRTSGSKTVESSDNEVESHANEKVTGAQGASSSCSEERREGVKRSSNGNIAPGSRHRRSFSLDSSIGSFHIGDELPGLPPLQNRVGQHSPSSSIDGKTSETNIKFGNGEFSSEELKKIKENDKLAEIAMADPKRAKRILANRLSAARSKERKMRYISELELKVQTLQTETTTLSTQFTKLQMDNSELKSENNEYKLRIQALEQQSQLKDALNETLDAEVRRLRRTVAELGGESLLSSRMAQQLAISQQMFQLQHQQHPSQLRHGQLHNSHSQEQTQTQSQRHNGKATAC 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01360 542 Gene3D - 385 451 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 126 157 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 1 81 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 324 358 - -
Pste8g01360 542 Pfam bZIP transcription factor 386 444 IPR004827 GO:0003700|GO:0006355
Pste8g01360 542 MobiDBLite consensus disorder prediction 50 81 - -
Pste8g01360 542 SMART brlzneu 382 446 IPR004827 GO:0003700|GO:0006355
Pste8g01360 542 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 384 447 IPR004827 GO:0003700|GO:0006355
Pste8g01360 542 Coils Coil 402 422 - -
Pste8g01360 542 FunFam Transcription factor VIP1 isoform A 384 446 - -
Pste8g01360 542 SUPERFAMILY Leucine zipper domain 386 441 IPR046347 GO:0003700|GO:0006355
Pste8g01360 542 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 80 536 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 503 542 - -
Pste8g01360 542 Coils Coil 430 485 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 1 43 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 337 358 - -
Pste8g01360 542 MobiDBLite consensus disorder prediction 250 312 - -
Pste8g01360 542 CDD bZIP_plant_RF2 387 459 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01360 Pste-Chr8 7282274 7286717 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste8g01360 bZIP_1 1.8e-10 CL0018