Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01349 CATTTATATACATTTACCTTTCCCTGTCTCATTAAGTGTGGGTGGGTTTTTGCATATTTAGCTTTTGGTTCTTCACTATCTATAATACAATATTACTTGTTTTTGTTTGATAAGGATTTGGATTATTTTCATTGAGGCCTTGTGATGGAGAAGTGGAAGAAAGTGACGGCATAAAGGAATCGTTTCGAAATTGTTGTGTTCAAAACCTAGGGTTGCAAAATGGATGGAGAGGATGTTAGGTCTGTGACCAAGAAGAAGCGATCCAAAAAGGAAATTGGTTTTGACTCTGATGACGACGAGCCCATTGGGTCAATCTTTAAGCTAAAGAGGTCCAAGAAGAAGGCTAGTTGTAGTGATGCTGCTGTTAGGGAAAAGGAGGATTTTGGGGGTATGGATGATAATGATACCTTGGCTAGCTTTAGGAAGAGGTTGAAGGGTCCTAAGAAAGATCAGGGATCTGGGGTTACAAGAGGATCAAGTCCTGCCTTGCATGTCTCTGATGAAGATTTGGTTGCTTTGGGACCTAAGGGTAAGGATCAGAAAGGGGTGCTGCCTGGTCACGAGGACATGCAGATGCAAGATTGTTCTGATCAACACATGGAGGATTCATTGTCTGCAATTTTCCACAAGGCACAGTCTAGTTCTGCTAGGAAATCTCGCGGGGGTTTGAGGCAGAAAAGGGGATTTCAGAATGTTGATAATGGGTTGAGCCCTGAAGCTTTTGTGGAAGCTGTGGATTCTGTGATTGAAAGTAGATCTGGATCTGCTTCTGCCTCGAAATTGGTTGAGGGTAATGTTGTGTCTGCTCATGCTTTGCTTCAAGCGTCTGAACCATTTGTTGCATCTGTGGTGGATGATCAGAAGTGTGGTGATGACTATTTTGAAGAGGAAACTTCCAAGGGCGATTGTCGTTTGGACATTCCAAATGGACCATCCCAGGCAAACAATGGCTGTCATGGAGATAGGGAACCATTGCCGGGTGTACAAGTTGAGGATATCTGTTGTGATTCTGACCAAAAGGAGGCTGCATTGCAGGAAAGTGTTCGCAGTGGTGGTTTAAATAAGTTATCTTCCTTGTCACATGATGAAATAGTTGATACTGTCTCTCTCTCAAATGTGGGGGAAGGGGAAAGAGTATTTACTGATGTAGGAGAGTCCAAGAACAGAATGGCTGATGAACTAGCACAAGCGAGCAACAGTGATTCAGAACCCGACATTTCTGCATCTGCGGGGAAACAAAATGCCTTAACTTCTTGCCTCACTGAACCCTTGATTAAATCAACTGAAAATATTTTGAATGAGAATAATAATAGGGTTTCTGGAAAAGTTTTCCAGGAATCCTCAAGTAATGGTGGTCTAAAGTTATCTGAAAGCTATGCGGAAGTAGATGGAGGTGGAAAACCAGAAACTGAGTTTGTTTCTGACAGAAATTTATATCATTATAATAGTTTAGAAACAAAAGCTGAAATGAAAGATTTTGTTTTAGGTTTTTCATCTAAAATAAATGATGTAATTGTCAGTGGTAGTTTATCTTCTATGGTGTCCAATGAAGCTGAATTAGCTGCCCACTCAAATCACCCCGAGAAACCTCTAGAAACTTGCAATATTCCAAAAGAACCTACTGCTTCAATTCTGAAATGTAGCACAGTGTTAGATCCAATTCAATCTGATGGATCCTCTCTTCATTCTTCAATTCCAGATGAAAATGGGAACTCTGCAGAATACCATGCCTCTGTGTCTGATTTTGCTGATAACGACAGTAAGATATCAACCATTCCCCGGGCAGTACGAAAGGCCAAAATGCGTAAGCATGGGGACATGACATATGAGGGGGATGCTGACTGGGAGATTTTAATTAATGATCAAGCTATAAATGAAAGTCAAGTTATGACAGATGGTGACCGCACTCTCAGAACAAGAATGAAGCATGATTCCTCTTCAAATACTGGTGAAGACTCAGAAAATGTTGCAGTAGTAGCGGTATCAGCTGGCCTGAAAGCCCGCAAAGCTGGTCCAATCGAGAAAATAAAGTTTAAGGAGATCTTGAAGCGCAAAGGTGGTCTCAAGGAATATTTGGATTGCAGAAATCAGATTTTAAGTCTCTGGAACAGAGATGTCACACGAATCTTGCCCCTTGCTGAATGTGGTGTTAGTGATACTCAATATGAGGATGGAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCTTTTCTTGATCAATATGGTTATATAAATGTTGGAATTGCCTCTCAGAAGGAAAATGCTGGAAGTAGTGCAAGGCATTGTTATAAACTGGTTAAAGAAAAAGGTTTTGAGGAAAGTCTTGCAGCTTCAATGGCTGACTCTGAAGATGGAGTTTCCTTTCTTGTTGGTCAGACTAAAATGTCTGGTACTTCCAATGAGATTAACAATGGACTAACAAAGGATTGCGATGACCTAACAACTGAAGCTAAAGAAGGCAATTCTAATGAAGTGAAGATGGATTTATCATACATGACACAACAGGCAGAAAGAAAAAAAATTGCGTACCTGGAAAACGTTGAGTTTCAGGATGGAACTATACGTGGCACTACTGACAGTTCTGTTCCTTCTTCCGACTTTCATGATTGCAGATTGACTCCTTTGGTAGCTGAAGAGAAAAGCAATGACTGTACCTGCATTAATTCTGCCTTAGGTGATCAGGTTGGTGATAATCTGCAGTCTGATTTAGATCCTAGGAAGGGAGTAATTGTCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTGCAACGCCAGGGATTTCCTGTAACTGTGCTTGAGGCTAGGAGTAGGATAGGGGGTCGTGTATTTACTGATCATTCATCTCTTTCTGTCCCTGTTGACCTCGGTGCTAGCATTATAACCGGTGTTGAGGCTGATGTGGCCACTGAAAGAAGACCAGATCCTTCGTCATTGATTTGTGCTCAGTTAGGGCTTGAGTTGACAGTGTTGAACAGTGATTGCCCTCTTTATGACACAGTGACAGGGCAAAAAGTTCCTGCAGATATGGATGAAGCACTGGAGGCTGAGTATAATAGTCTTATTGATGACATGGTGTTGGTGGTTGCTCAGAAAGGTGAGCAAGCAATGAGAATGTCTCTTGAAGAAGGTTTAGAATATGCCCTTAAGATTCGTCGTATGGCACGCTCTGAAAGTAGTGAAGAGACTGAACAAAATAATTCTGCAGATGTTCCATTTGATTCCAAAAGAGACAGTACTGTTGAAAAAAAACTTGATGAGGAAATTTTGAGTTCTCAGGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGCTGTGCTGCTTTGCTTAAGGATGTTTCTCTTCCCTACTGGAATCAGGATGATGTGTATGGAGGTTTTGGGGGGGCTCATTGTATGATTAAAGGGGGTTACAGCTCTGTTGTTGAGTCTCTGGGAGAAGGACTAACAGTTCATTTGAACCATGTTGTAACAAATGTGTCATATGGTATCAAGGAACCTGGCCAGAGTAACAAAGTTAAAGTTTCTACATCAAATGGCAGTGAGTTCATTGGTGATGCTGTCCTTGTGACTGTTCCACTTGGCTGTTTGAAGGCTGAAACTATACAATTCTCCCCAGCTTTGCCACCGTGGAAATATTCTTCTGTTCAACGTCTTGGTTTTGGAGTTCTAAATAAAGTGGCTTTGGAGTTTCCTAGTGTATTTTGGGATGATGCTGTGGACTACTTTGGAGCAACTGCTGAGGAGAGAAGCAGTAGAGGTCACTGCTTTATGTTCTGGAATGTCAGGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTGGTTGGTAAGGCAGCTATAGATGGTCAAAACTTGAGCTCTTTTGATCATGTTAACCATGCATTGAAGGTTCTCCGGAAACTTTTTGGTGAGGATTCAGTTCCTGATCCTGTTGCTTATGTTGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTATTCTTATGTTGCTGTTGGAGCATCAGGAGAAGACTATGATATATTAGGGAGACCAGTTGAGAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCAGATACTGTCGGTGGTGCAATGATGAGTGGACTACGAGAGGCTGTTCGCATAATTGATATATTGAACTCAGGAAATGATTATATAGCAGAGGTGGAGGCATTGGAAGCTGCACGGGGACAGTTAGACACTGAAAGAGATGAAGTTAGGGATATAATAAAGAGGCTTGATGCAGTGGAACTTTCTAACATCATGTACAAGAACTCTTTAGATGGTGCTCAAATTTTAACCCGTGAAGCTTTGTTAAGGGAAATGTTCTTTAATACAAAAACCACTGCTGGACGATTGCATGTGGCCAAGCAATTGCTAACTCTTCCTGTTGGAAACTTGAAGTCTTTTGCTGGAAGTAAAGAGGGCCTAACCATTCTCAATTCATGGATACTGGATTCAATGGGGAAGGATGGTACCCAACTCTTGAGGCACTGTTTACGTCTTCTTGTCCGTGTTTCAACCGATCTTCTTGCTGTAAGATTGTCAGGAATGGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGTCGAGATATTCGGGCTATAGCAAGCCAGTTGGTCAATGTATGGCTTGAAGTTTTCCGCAAGGGAAAAGCTTCTAATGGTGGATTGAAGTTATCAAGACAAACAACTGCTGTAGATTTATCAAAGAGAAAATCTGTAAAAGATTCAGCCTCGGGAAAGCCTCCTCTGAGCACATATCATGGTAATATTGAGAATAAAGGAATTTCTGCTGGAAGCAATTCACCATCCACTGCACATGTGAAGAAATTGCATGGAAAACAAGGAAGACAACCAACAGCATATGACTCAAGGCATGAGGTCAGTTCTTCCAGGTCTAAAGGTTCAATAGACAAAGTAGTTCCTGAGAAGGAGGATAACCACTATACCATATCTGAAGAAGAACAGGCTGCTATAGCTGCTGCAGAGGCTGCCCGTGCTAAAGCTCTTGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCCAGATGCAATACATTGTTACAGCTTCCAAAGATACCCTCATTCCACAAATTTGCTAGACGTGAGCAGTCTTCACAAAATGACGAGTGTGATAGTAGAAAAAGATGGTCTGGTGGTGTTTTTGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTCTCCGCTGCTTGTGTCAACCTTGATAATTCCAGAATGCCTGTTGATAGCCTCTCACAGAGGAGTCATTCAAATGAGATTGCCAGCCATTTGAATTTCAGAGAGCACTCAGGGGAAAGTGTTGCTGGGGACAGCAGTATATATACAAAAGCTTGGATTGACACAGCTGGCGGTGTTGCAATTAAAGACTATCATGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCTGATTCTTTTTTTTCTAACCCAACTATTAATTTGAAGGACGAGGAGGATTCAAATGCCTGTTCAAAGCCACCTAGCTGGAAGCGTGAGGGTATTGCAAATGAGAGTTCTATTTCACAGGTTACTGTCAATAAGGAGGCCCAAAAAAGTCATTCCCGAGGAGCAGATCATATTAAACAGGCTGTTGTGGACTATGTTGCATCACTACTTATGCCCCTTTATAAGGCAAGGAAACTAGACAAGGATGGATACAAGGCTATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCCACTGATGCAGAAAAAGCCATGACTGTTCCTGAGTTTCTAGATTTTAAGAGAAAGAATAAGTTGCCAAATTCTGGTTTTTCTTCCTACTCCAGTTCTCGTATGAGCATGTTGGCCATGGTAATGGTTCAAAGTTGTGCCATGGAATGCCTAACAGCTCAAGTCTTTTATATTGTTGTGTATAATTCGTGGGCTGCTGTTCTGTCTTGGCCGTTCTCGTGTACTAATTATTGCTTACACCTCTTCTATGATTGTCTTCATGCCAGCAGTACGAAATACTGGATTAAAAAATGTTGCTGCCAGGAAATTAAATTCCGCTGGGTGTTTCTAGGGGTGTGGGATTGCTCTAAGGCTTTCCTATACTTC 6159 0.4199 MDGEDVRSVTKKKRSKKEIGFDSDDDEPIGSIFKLKRSKKKASCSDAAVREKEDFGGMDDNDTLASFRKRLKGPKKDQGSGVTRGSSPALHVSDEDLVALGPKGKDQKGVLPGHEDMQMQDCSDQHMEDSLSAIFHKAQSSSARKSRGGLRQKRGFQNVDNGLSPEAFVEAVDSVIESRSGSASASKLVEGNVVSAHALLQASEPFVASVVDDQKCGDDYFEEETSKGDCRLDIPNGPSQANNGCHGDREPLPGVQVEDICCDSDQKEAALQESVRSGGLNKLSSLSHDEIVDTVSLSNVGEGERVFTDVGESKNRMADELAQASNSDSEPDISASAGKQNALTSCLTEPLIKSTENILNENNNRVSGKVFQESSSNGGLKLSESYAEVDGGGKPETEFVSDRNLYHYNSLETKAEMKDFVLGFSSKINDVIVSGSLSSMVSNEAELAAHSNHPEKPLETCNIPKEPTASILKCSTVLDPIQSDGSSLHSSIPDENGNSAEYHASVSDFADNDSKISTIPRAVRKAKMRKHGDMTYEGDADWEILINDQAINESQVMTDGDRTLRTRMKHDSSSNTGEDSENVAVVAVSAGLKARKAGPIEKIKFKEILKRKGGLKEYLDCRNQILSLWNRDVTRILPLAECGVSDTQYEDGSPRSSLIREVYAFLDQYGYINVGIASQKENAGSSARHCYKLVKEKGFEESLAASMADSEDGVSFLVGQTKMSGTSNEINNGLTKDCDDLTTEAKEGNSNEVKMDLSYMTQQAERKKIAYLENVEFQDGTIRGTTDSSVPSSDFHDCRLTPLVAEEKSNDCTCINSALGDQVGDNLQSDLDPRKGVIVIGAGPAGLTAARHLQRQGFPVTVLEARSRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDTVTGQKVPADMDEALEAEYNSLIDDMVLVVAQKGEQAMRMSLEEGLEYALKIRRMARSESSEETEQNNSADVPFDSKRDSTVEKKLDEEILSSQERRVMDWHFAHLEYGCAALLKDVSLPYWNQDDVYGGFGGAHCMIKGGYSSVVESLGEGLTVHLNHVVTNVSYGIKEPGQSNKVKVSTSNGSEFIGDAVLVTVPLGCLKAETIQFSPALPPWKYSSVQRLGFGVLNKVALEFPSVFWDDAVDYFGATAEERSSRGHCFMFWNVRKTVGAPVLIALVVGKAAIDGQNLSSFDHVNHALKVLRKLFGEDSVPDPVAYVVTDWGRDPFSYGAYSYVAVGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNSGNDYIAEVEALEAARGQLDTERDEVRDIIKRLDAVELSNIMYKNSLDGAQILTREALLREMFFNTKTTAGRLHVAKQLLTLPVGNLKSFAGSKEGLTILNSWILDSMGKDGTQLLRHCLRLLVRVSTDLLAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEVFRKGKASNGGLKLSRQTTAVDLSKRKSVKDSASGKPPLSTYHGNIENKGISAGSNSPSTAHVKKLHGKQGRQPTAYDSRHEVSSSRSKGSIDKVVPEKEDNHYTISEEEQAAIAAAEAARAKALAAAEAYASAEARCNTLLQLPKIPSFHKFARREQSSQNDECDSRKRWSGGVFGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNSRMPVDSLSQRSHSNEIASHLNFREHSGESVAGDSSIYTKAWIDTAGGVAIKDYHAIERWQSQAAAADSFFSNPTINLKDEEDSNACSKPPSWKREGIANESSISQVTVNKEAQKSHSRGADHIKQAVVDYVASLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMTVPEFLDFKRKNKLPNSGFSSYSSSRMSMLAMVMVQSCAMECLTAQVFYIVVYNSWAAVLSWPFSCTNYCLHLFYDCLHASSTKYWIKKCCCQEIKFRWVFLGVWDCSKAFLYF 1980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01349 1980 ProSiteProfiles SWIRM domain profile. 583 683 IPR007526 GO:0005515
Pste8g01349 1980 MobiDBLite consensus disorder prediction 43 117 - -
Pste8g01349 1980 SUPERFAMILY Homeodomain-like 581 678 IPR009057 -
Pste8g01349 1980 Pfam Flavin containing amine oxidoreductase 845 1315 IPR002937 GO:0016491
Pste8g01349 1980 PRINTS Adrenodoxin reductase family signature 836 858 - -
Pste8g01349 1980 PRINTS Adrenodoxin reductase family signature 859 872 - -
Pste8g01349 1980 SUPERFAMILY FAD-linked reductases, C-terminal domain 1153 1264 - -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 987 1009 - -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 1509 1577 - -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 43 77 - -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 1774 1794 - -
Pste8g01349 1980 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1413 1496 IPR035441 -
Pste8g01349 1980 Gene3D - 582 686 IPR036388 -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 98 112 - -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 1520 1549 - -
Pste8g01349 1980 Gene3D - 837 1313 IPR036188 -
Pste8g01349 1980 PANTHER FLAVIN MONOAMINE OXIDASE 837 1322 - -
Pste8g01349 1980 SUPERFAMILY FAD/NAD(P)-binding domain 834 1318 IPR036188 -
Pste8g01349 1980 Gene3D - 943 1270 - -
Pste8g01349 1980 Pfam SWIRM domain 596 673 IPR007526 GO:0005515
Pste8g01349 1980 MobiDBLite consensus disorder prediction 1 28 - -
Pste8g01349 1980 MobiDBLite consensus disorder prediction 135 161 - -
Pste8g01349 1980 Coils Coil 1331 1351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01349 Pste-Chr8 7232944 7245476 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Pste8g01349 Amino_oxidase 1.2e-104 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01349 8 7232944 7245476 Pste8g01349 8 7232944 7245476 ECH