Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01331 TTAAGATTCCCGAAGGTTCTTGTTCTGATATGGATATTATCTCTGAATTGGGGATCGTAGAGTGCAACAATAGATTATGGCTGGCTTCTTCTCTCTAGGAGGAAGGCATAACAAGGCAGAACAGGAAGAGGATCAAAGAGAAGACAACGTTAACGCCGGTAATAACAGTCAATTTTTGTTCAGGAACGTCAACGAGGAGATCTACAACAAGGGGTTCGAGATATGGCCACAATCCTCGTACCATCAGAACTTGAGCAACTACTACTCCTTCGGGGTCGGTCCTAGTCGCAGGAACAACAACAACAGCTCCTCCAACAACGTTAACGACGACGTTTCTGTCTCTTTCTCGGATGAGTCCAACCGGTTCGGCTTCACGGTGATGAGGTCCGGTGCCGGCGTAGGAGGCGGCGGCATGAACTGTCAGGACTGTGGCAACCAGGCCAAGAAAGACTGTCAACACCTCAGATGCAGAACTTGCTGCAAGAGTCGAGGGTTTCAGTGCCAAACGCACGTTAAGAGCACTTGGGTTCCTGCGGCCAAACGCCGTGAACGACAGCAACAACTCGCTGTATTGCAGCAACAAAATCAACAACCACAGTTTCGTGGAGACCATTCTAAACGACACAGAGAAAGTATCGAAGGTGCTGCTGCTGGTTCTCTCGCTTGCGCTCCTGTTCCTATCACCACCACAGGGTTGGAGCTGGGGCAATTTCCACCAGAGCTAAACTCTCCAGCGGTGTTTCGGTGTGTGAAAGTTAGTGCAATGGATGCACCAGATGAGCGTTACGCGTATCAAACAGCAGTGAACATAGGTGGGCACGTGTTCAAGGGAATTCTCTACGATCAAGGAGCAGATGGTCCTTACGGGAGTGCAGGTTGTGAGGGTTCCTCCGGTGGCGGCGGTGAACCTCAGCCACTAAGTCTCATAGCAGCAACAACCACCGCCACAACAAGCGGAAACCCTTTTGACGCTTCACTCTACACGGCTCCGATGAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCACGATCCTAAGGACGTTTCTCTCTCTCTCTCTCTCTGTCTATCTAATAATGATTGAAAGTTGAAACCGGGGTATTTCATCCTCATGGACTCTTACTATGGTTAAGGTTGTTGGGTGTTATATGTGCATCTTAAGTTCCTAACATCATCAGCTGAAGTAGCTACTAGCTAGACTAGTTAAGAGTTCATAAATGATTACGTCGACGATGATTCACCAAATTAAAGGGTGGCTGGGATGTTTGTTTTCTTTGTTTTGTCCGAATCTCAGTTCAGATTTTCATGTTGTTTTGTTGTTATCGAAATACTCACTC 1341 0.4795 MAGFFSLGGRHNKAEQEEDQREDNVNAGNNSQFLFRNVNEEIYNKGFEIWPQSSYHQNLSNYYSFGVGPSRRNNNNSSSNNVNDDVSVSFSDESNRFGFTVMRSGAGVGGGGMNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAVLQQQNQQPQFRGDHSKRHRESIEGAAAGSLACAPVPITTTGLELGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGADGPYGSAGCEGSSGGGGEPQPLSLIAATTTATTSGNPFDASLYTAPMNAFMAGTQFFPPPRS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01331 321 NCBIfam LRP1 C-terminal domain 211 258 IPR006511 -
Pste8g01331 321 Pfam Domain of unknown function (DUF702) 112 260 - -
Pste8g01331 321 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 294 IPR007818 GO:0003700|GO:0006355
Pste8g01331 321 MobiDBLite consensus disorder prediction 1 28 - -
Pste8g01331 321 NCBIfam putative zinc finger domain, LRP1 type 114 156 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01331 Pste-Chr8 7129290 7131184 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pste8g01331 DUF702 5.9e-65 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01331 8 7129290 7131184 Pste2g00764 2 8038296 8039960 PCT