Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01311 CCCAAACTGTGGATTCTTGTCTGTAATTTTTGCTCTTAACCTCTTCTCTTACCCTTCTTTGTTTCTCTTCCTACTACACTCTGCATCTCCCTTTCTCTTTCAGTTTCAGGTACTCTATTGTGATAAGCTTTTGTTTGAGGAACATCATCACCTCAGTGAATAAAATCTTGTAGCAGAGATAACATTATATATTTAGCTCAGGCATATTACTGGTTTCTCAAACCTAAGCGGTGAAGGATATGTGCACAGCTCTGAAGGGACCTGAAACAAGTATCTGAATTTCAATTGCTAATTTTACAATGTATCCGAATCAGGCCTTTTCTTCAGGGTCTTATGCCGGTATATTATCTGGGAATCCTCTTTTACCGCATAATTACAGTGAAACTATAGAAGGACAAACTGAGTTGAAGTTCATCAATTCCATGAGGAACACAATGACTATGCAGCCTATTGATGGACATTCCAATGCTGCCAGTGCGGGTGATCCAGACTCTTTTGCTAATGCCGGAGATTCCCATGTTATTCCAAGGACAACACAGTTGGGGCTTGTGGACAGTGAGCAAAATGTACAGAACCAAGGCTTGTCTCTTAGCCTTGGCTCAGTGATGCCTTCTATTGCATCTGTTCCTACCTTTCCATATCAGTATACCGGAAGCAGTTTCTCCTCACTAATGACTGCTTCTGTCCCAAATTTAAAGGGCACATCATCTCTAAAAGATGATGAGACCAGCCTACAAACGGAATTTAGAAATGCTGAGTGCATGGCATCTTTAGCTTCTGGAGGATTTCACAAAAGGGAGGGTTTGTATAATCTACACCCCTTAATGTGCCTCAGTGAAGGCCAAAGTGATGGCTCACAAGGTTTTTCCAACAATGTCTTGAACTCACAATATCTCAAAGCAGCACAGGAGTTGCTTGATGAAATAGTTAATGTCCGAAAGGCTTTACAGCAAACTGGTTTGGAGGAGCAAAGGAGTTTCCGTGATATTGGTTTAAATGGAGGCAAAGATTCTGATGGAAAATCTACCAGCCAATCTGTGCAAAAATCCTCAAGCCCCAATGGTTCTGCTGCAAACTCTTCATCTGAGCTATCACCTGCGGAAAGACAGAATTTGTTGGACAAGAAGACAAAACTTTTGTCCATGTTGGATGAGGTAGATAAAAGATACCGACAATACTGCCATCAGATGCAGATTGTGGTGTCATCTTTTGATATGGTGGCTGGTTGTGGAGCATCTGAACCATACACAGCGCTTGCCTTGCGCACAATATCGCGCCACTTCCGGTGTTTGCGTGATGCCATTAGCAGCCAAATTCAAGTGACTCAAAGGAGCCTTGGAGAACAAGAGGGAATACCTCGTCTCCGCTATGTTGATCAGCAACTTCGACAACAAAAGGCCCTTCAGCAACTTGGTGTAATGCGTCAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAACCTCTGTTTCAATACTCCGTGCATGGCTCTTTGAACACTTCCTTCATCCGTATTATCCAAAGGATTCAGAGAAAATTATGCTGGCGAGGCAAACTGGATTAACAAGAAACCAGGTAGCAAATTGGTTCATTAATGCAAGGGTGCGACTTTGGAAGCCAATGGTAGAAGAAATGTACAAAGAAGAATTTGGTGACTCTGAGATGAGCAGCAATCTATTATCTGCAGAGAACACAGTGAAAGTTCCTAGGGATGATGTTCAAGCTTCTGACAATAAAAGGGAAGAGTCGTCCCAGGACAACTTAGTAACACAAGATAGTGTGCATCATGCGGTGACGTTGGATCATGCCTCAGAGTTGGATAAAGGGATCCAAGGTAGTGATCATGGAGAAAATGCTATGGATCATACAATTGGGAAATTGCAAGGTGACCAAAGGATCAATATGAACAACAACAGTGGTCCTTACTACGGTGATGGCTGCTTAATGACTTCAACTTCTGCTACATATGATTTATCAGAGTTAGGTAACATTGCTGTGGGTGCACATGTGTCTCTTGCATTGGAATTGAGGAACTGTGAAAGTGAAGGATTTGGCGTGTCCAATGATGACATGCACAAAAGACTTAAGAAAACCTTGGCTTCTTCCCCAGAAGCTGATTTGCTAGATTACCATTTCACAGACCCTGGAAAGCAACAAAACAAGTTTGACAATCCTCACCTATTGCACGAGTTTGTTGTGTGAAGGGTTGGCAAAAGATTTATTGTTTTCAAGGGAATTATGGAAATTTGTACCACCAAAGTAAATAGATAGACAAAGCCTCTGTTTTTACTTGGTTGCTCATTCTTGTTGGCCACACTTCATAAAAGCGATGTAAATCACGAACCTTACAAAAATATACACGTAGATATGTGTAGATATTCCCTTGTAATATCGTGGATGATTGGTTGTATTATGTGCAGGCAATTTTGTAAGGACAAGGAACGTATCTTATGCATTATGATGAATAAGGAATCTTGTCAATATCGTAAAAGGAGTAGTGCCATCTGAATGCATTGACTCTTG 2519 0.4168 MYPNQAFSSGSYAGILSGNPLLPHNYSETIEGQTELKFINSMRNTMTMQPIDGHSNAASAGDPDSFANAGDSHVIPRTTQLGLVDSEQNVQNQGLSLSLGSVMPSIASVPTFPYQYTGSSFSSLMTASVPNLKGTSSLKDDETSLQTEFRNAECMASLASGGFHKREGLYNLHPLMCLSEGQSDGSQGFSNNVLNSQYLKAAQELLDEIVNVRKALQQTGLEEQRSFRDIGLNGGKDSDGKSTSQSVQKSSSPNGSAANSSSELSPAERQNLLDKKTKLLSMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGASEPYTALALRTISRHFRCLRDAISSQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPETSVSILRAWLFEHFLHPYYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMSSNLLSAENTVKVPRDDVQASDNKREESSQDNLVTQDSVHHAVTLDHASELDKGIQGSDHGENAMDHTIGKLQGDQRINMNNNSGPYYGDGCLMTSTSATYDLSELGNIAVGAHVSLALELRNCESEGFGVSNDDMHKRLKKTLASSPEADLLDYHFTDPGKQQNKFDNPHLLHEFVV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01311 632 Pfam Associated with HOX 193 336 IPR006563 -
Pste8g01311 632 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 111 474 - -
Pste8g01311 632 SMART HOX_1 378 443 IPR001356 GO:0003677
Pste8g01311 632 MobiDBLite consensus disorder prediction 49 72 - -
Pste8g01311 632 MobiDBLite consensus disorder prediction 237 268 - -
Pste8g01311 632 MobiDBLite consensus disorder prediction 460 491 - -
Pste8g01311 632 Coils Coil 199 219 - -
Pste8g01311 632 Pfam Homeobox KN domain 395 435 IPR008422 GO:0003677|GO:0006355
Pste8g01311 632 SUPERFAMILY Homeodomain-like 380 446 IPR009057 -
Pste8g01311 632 MobiDBLite consensus disorder prediction 469 485 - -
Pste8g01311 632 Gene3D - 375 453 - -
Pste8g01311 632 CDD homeodomain 378 440 IPR001356 GO:0003677
Pste8g01311 632 ProSiteProfiles 'Homeobox' domain profile. 396 439 IPR001356 GO:0003677
Pste8g01311 632 MobiDBLite consensus disorder prediction 227 268 - -
Pste8g01311 632 SMART prehox3 187 337 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01311 Pste-Chr8 6943189 6947698 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste8g01311 POX 3e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01311 8 6943189 6947698 Pste8g01311 8 6943189 6947698 ECH