Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01307 GTCAAATTTATTAGCGTAATGTTAACAAGAATGATAGTTGATAGTTGATAGTTGATAGTTGATAGTTGTGGGATTGGATTTGGAGGTTGAAGAAAGAGATGAGCAGAGCGGTCCTCTACGGTCGGGTTATTCAATCCTCATCATCACCGTTGTTTCAACGAGGCTATCGTTATTTATCACCACCAATCCCTATTTTGCCCTTATGCTTATCTCCTCTCCCTCTCCCTCTCAGTCTCACCACCTCCGTGCTCCACCGCGATTCTGCAGTTGAACTCGCATCCTCGTCTTTTGACTCCAACGACGCCGTTTTACCCCTAAATGGAACGGAGACAGAGCAGCAAAGCCAAGACAAAGGAGAGAGACTTCCTAAGAAGAAAGAAGACGGCGTCGTTTCCGATAACCGCTATAAGCTCCGCAACGGAAGAGAGGTTTTTGAAGAAAAAGCCTACCTCGTAGGTGTTGAGAGAAAGAACCATGTTCAGGAGTTTGGAATAGAAGAATCTCTCAAGGAGTTGGCACACTTAGCTGACACTGCCGGATTATTGGTTGTTGGCTCTACTTACCAGAAGCTTACTTCTCCAAATCCTAGAACGTACATTGGCTCTGGCAAGGTTTCTGAAATTAAGAGTGCAATTCATGCATTGGGCGTTGAAACTGTGATATTTGATGATGAGTTGTCAGCTGGGCAATTGCGCAACTTGGAAAAGATTTTTGGTGGAGATGTGAGAGTTTCATTAGCACAAATGGAATACCAACTGCCTCGACTAACAAAAATGTGGACTCATCTTGAGCGTCAAGCAGGAGGAAAGGTGAAGGGAATGGGCGAGAAACAAATAGAAGTGGACAAACGTATTCTGCGGAACCAAATTGGTATTCTCAAAAAAGAGCTAGAATCTGTTAGGAAACATCGAAAGCAGTACCGTAACAGGCGTTTCTCTGTACCTGTGCCAGTGGTATCCTTGGTTGGTTACACAAATGCTGGTAAGAGTACACTTTTGAATCAACTGACTGGGGCAGATGTTCTGGCCGAGGACAAATTATTTGCAACTTTAGATCCCACTACAAGGAGGGTACAGATGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAGTTACCTACTACACTAATTGCTGCTTTCAGAGCTACACTAGAGGAGATATCGGAGTCATCACTCTTAGTGCATGTGGTTGATATAAGTCACCCCCTGGCTGAGCAACAGATAAATGCAGTGGACAAAGTGCTGTCAGAACTAGATGTGTTATCAATTCCAAGATTGATGGTCTGGAACAAGGTTGATAAAGTTAGTGATCCCAAGAAACTCAGGCAAGAAGCTGAAAAAAGGGATGATGTTGTATGCATATCTGCTTTAAGTGGCAATGGCTTACAAGAATTTTGTAATTCAGTTCAAGACAAGTTAAAGGACTCCATGGTTTGGGTGGAAGCTTTGGTCCCATTTGAAAATGGGGACCTTCTCAGCACAATACACCAGGTTGGAATGGTGGAGAAAACTGAATATACAGAGCAAGGGACATATATCAAGGCACATGTGCCCCTGCGTTTTGCAAGAATGCTTACACCCATGAGGCAACTGTGCGTATCGCAACCTTAACTTTCTTTAATATATCTAATTTTGCAACATAACATGTACATATATATGTAATTACTGAAATCATGCTCGCAAGCCCTTCATGGGATGGCAATGTAAAATGTATCTGGAACTGAAGTTAGTAGTCATGCGTATCCATTCCAATTTGTATTCTTTCATGTTATTGAGTAATATGACTGGGTTATGTTGAAAGAGAAAGACAAGTGAGTCCTATAACCTA 1845 0.4228 MSRAVLYGRVIQSSSSPLFQRGYRYLSPPIPILPLCLSPLPLPLSLTTSVLHRDSAVELASSSFDSNDAVLPLNGTETEQQSQDKGERLPKKKEDGVVSDNRYKLRNGREVFEEKAYLVGVERKNHVQEFGIEESLKELAHLADTAGLLVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALGVETVIFDDELSAGQLRNLEKIFGGDVRVSLAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEVDKRILRNQIGILKKELESVRKHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLIAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVLSIPRLMVWNKVDKVSDPKKLRQEAEKRDDVVCISALSGNGLQEFCNSVQDKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFARMLTPMRQLCVSQP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01307 509 FunFam GTPase HflX 283 452 - -
Pste8g01307 509 Pfam GTP-binding GTPase Middle Region 208 278 IPR032305 -
Pste8g01307 509 PRINTS GTP1/OBG GTP-binding protein family signature 286 306 IPR006073 GO:0005525
Pste8g01307 509 PRINTS GTP1/OBG GTP-binding protein family signature 353 371 IPR006073 GO:0005525
Pste8g01307 509 MobiDBLite consensus disorder prediction 68 96 - -
Pste8g01307 509 Gene3D - 210 269 - -
Pste8g01307 509 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 284 450 IPR030394 GO:0005525
Pste8g01307 509 Hamap GTPase HflX [hflX]. 136 475 IPR016496 GO:0005525
Pste8g01307 509 Pfam HflX C-terminal domain 414 484 IPR045498 -
Pste8g01307 509 CDD HflX 243 446 IPR030394 GO:0005525
Pste8g01307 509 MobiDBLite consensus disorder prediction 81 96 - -
Pste8g01307 509 NCBIfam GTPase HflX 207 445 IPR016496 GO:0005525
Pste8g01307 509 Pfam 50S ribosome-binding GTPase 286 404 IPR006073 GO:0005525
Pste8g01307 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 284 456 IPR027417 -
Pste8g01307 509 PANTHER GTP-BINDING PROTEIN HFLX 210 493 IPR016496 GO:0005525
Pste8g01307 509 Coils Coil 257 277 - -
Pste8g01307 509 Gene3D - 283 451 IPR027417 -
Pste8g01307 509 Pfam GTP-binding GTPase N-terminal 133 207 IPR025121 -
Pste8g01307 509 Gene3D - 125 209 IPR042108 -
Pste8g01307 509 NCBIfam small GTP-binding protein domain 285 437 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01307 Pste-Chr8 6905257 6912826 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01307 8 6905257 6912826 Pste8g01307 8 6905257 6912826 ECH