Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01283 ATGGCCTCATCCAGTGGAACCTCGAGCGTGTCCACTAAATTCACTCAGAGCTCTGGCTCTCACCAGGATTTGCAGCTTCTGATGGAACAGAGAAAAAACAAGAGAAAGCAATCCAATCGTGATTCAGCCAGAAGATCCCGGATGCGAAAGCAGCAACACTTGGATGATCTCATTGCACAAGTGGAACGCCTCAAAAGGGAAAATAGCTTAATCCTCACTAATGTCAACATCACCACACAACAATATCTCAATGTTGAGGCTCAAAATTCCATTCTCAGGGCCCGCAAGACTGAACTTGCCCAAAGCCTAAAATCACTCAATCATATCATCAACTCAACAACCACCATCGGGGTCTACCAAAGCGATTGCTACATCTCAAGTCAGGTCACCAGAGTGGCATGCTACTCGTCACTGTCCAATGTTTTGGAAAAATGGATGTCGGTGCAAGCGTAA 453 0.4592 MASSSGTSSVSTKFTQSSGSHQDLQLLMEQRKNKRKQSNRDSARRSRMRKQQHLDDLIAQVERLKRENSLILTNVNITTQQYLNVEAQNSILRARKTELAQSLKSLNHIINSTTTIGVYQSDCYISSQVTRVACYSSLSNVLEKWMSVQA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01283 150 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Pste8g01283 150 MobiDBLite consensus disorder prediction 1 53 - -
Pste8g01283 150 MobiDBLite consensus disorder prediction 1 26 - -
Pste8g01283 150 FunFam BZIP transcription factor 29 81 - -
Pste8g01283 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Pste8g01283 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 92 IPR004827 GO:0003700|GO:0006355
Pste8g01283 150 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Pste8g01283 150 SUPERFAMILY Leucine zipper domain 31 85 IPR046347 GO:0003700|GO:0006355
Pste8g01283 150 Pfam bZIP transcription factor 30 72 IPR004827 GO:0003700|GO:0006355
Pste8g01283 150 Coils Coil 47 74 - -
Pste8g01283 150 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 113 - -
Pste8g01283 150 Gene3D - 29 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01283 Pste-Chr8 6828400 6829204 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste8g01283 bZIP_1 2.3e-08 CL0018