Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01250 GAGTTGAGACAATCAATATAAGGATCCTAAGGTACAAGCTTCAGCATTATAGTTGTTGATACATCAACAATGGAGCTGCAAGATTTGCCAGAAGGATGCATTGCAAAAATATTGTCATATACTACTCCTGTGGATGCAATTAGGCTCTCCTTAACTTCCAAGACATTTCGTTCTGCTGCTGAATCTGATACTGTGTGGGATTGTTTTCTCCTCTCTGATCATTTGCCCTCTATCATTCCTCCTTCCTCTACCTCAAAGAAGAATCTCTATTTCTCTCTCTCAGACCATCCCACCATTATCGATCAGGGTAGGAAGAGCGTTCAATTGGATAAAAGGAGTGGAAAGAAGTGCTACATGCTCTCAGCTAGAAATTTGGCCATTATATGGGGTGATAATGGTAATGTTTGGGAGTGGACAAGTCTGCCTGAGTCGAGGTTTAAAGAAGTTGCTGTGCTTCGTGCTGTTTGCTGGTTTGACATTAGTGGGAGGATAAATGCCCTTGCCTTGTCTGCAAATACTCACTATGCAGCTTTTCTTGTCTTCAAGATGATCAATGCTAGGGGATTTCACTACCATCCTGTGGTGTTATCAATTGGTGTTTTTGGAGGTAATAACAATAGAAAATATGTTTGTTTGGACCCCAACTTAAAAGGTAATCGCTTACAACAACTACAATGTCCTAAAGTAAGAAGTGATGGGTGGTTGGAGATTGAGATGGGAGACTTCTTCAATTCTGGCCTAGAAGAAAACCAAGTGCAGATGAAAGCCGTGGAGACCACTAGTCATATCTTGAAGTGCGGTTTCATTCTTGAAGGAATAGAAATTAGGCCCAAACATAAGCACGATATCAAATACCGTCCTGTGGGTGTATGCAGCCTCTTCTTAATTTCCAAGACATCACATTCTGCTGCTCAATCTCATACTAAGTTGCTAGGCTTCGTTCTGTTTGCTGTGATGGGTGATGTGAGAGATTTTCAATTCAGGCCTAAAAGAAAACAAAGTGCAAATGAAAGTCACGGAGACAACGAGTCATATCTGTGGAAGCATGGTTTCATTCTTGAAGGATTTGTGGAAGAACATCATCATAGTGGATACTTGATATCAATGGAGTTGCAAGATTTGCCAGAAGGATGCATTGCAAAAATACTGTCATACACCACTCCTATGGATGCATGCAGGCTGTCTTTAGTTTCCAAGGCCTTTTGCTCTGCAGCTGAATCAGACACTGTATGGGATTGTTTTCTCCTCTCCGATCTTACCTCTGTCATTCCCTCTTCCTCCTTTCCTTCCTTTACCTCTAAGAAGAATCTCTATTTCACTCTCTCCCACCATCCCATCATCATTCACCAGGGTACCCGGAGTGTTCAATTGGACAAAAAGACGGGAAAGAAGATTTACATGCTTTCAGCTAGAAATCTAACCATTATAAAGGGCGATAGTTATAATGTTCAACATTGGGAGTGGACAAGCTTACCAGAGTCCAGGTTCCAAGAAGTTGCTATGCTTCGTGCTGTGTGCTGGTTTGACATTAGTGGGAAGATAAACACCCTTGGCTTGTCCTCAAACACTCACTATGCAGCTTTTCTTGTGTTCAAGATGATCAATGCTAGTGGGTTTCACTACCATCCCACGGTGTTATCAGTTGGCATTTTTGGAGGCAGTAACAACACCAAATATGCTTGTTTGGACCCCAACTTAAAAGGTAGTCGCTTATGGGAACTACAACATCCTAATGTGAGAAGTGATGGGTGGTTGGAAATTGAGATGGGAGACTTCTTCAATTCAGGCCAAGAAGAAAACCAAGTGCAGATGAAAATTATGGAGGCAACAAGTCATATCTTAAAGCGCGGTTTCATTCTTGAAGGAATAGAAATTAGGCCTAAACATGTC 1890 0.4169 MELQDLPEGCIAKILSYTTPVDAIRLSLTSKTFRSAAESDTVWDCFLLSDHLPSIIPPSSTSKKNLYFSLSDHPTIIDQGRKSVQLDKRSGKKCYMLSARNLAIIWGDNGNVWEWTSLPESRFKEVAVLRAVCWFDISGRINALALSANTHYAAFLVFKMINARGFHYHPVVLSIGVFGGNNNRKYVCLDPNLKGNRLQQLQCPKVRSDGWLEIEMGDFFNSGLEENQVQMKAVETTSHILKCGFILEGIEIRPKHKHDIKYRPVGVCSLFLISKTSHSAAQSHTKLLGFVLFAVMGDVRDFQFRPKRKQSANESHGDNESYLWKHGFILEGFVEEHHHSGYLISMELQDLPEGCIAKILSYTTPMDACRLSLVSKAFCSAAESDTVWDCFLLSDLTSVIPSSSFPSFTSKKNLYFTLSHHPIIIHQGTRSVQLDKKTGKKIYMLSARNLTIIKGDSYNVQHWEWTSLPESRFQEVAMLRAVCWFDISGKINTLGLSSNTHYAAFLVFKMINASGFHYHPTVLSVGIFGGSNNTKYACLDPNLKGSRLWELQHPNVRSDGWLEIEMGDFFNSGQEENQVQMKIMEATSHILKRGFILEGIEIRPKHV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01250 607 Pfam F-box-like 349 389 IPR001810 GO:0005515
Pste8g01250 607 SUPERFAMILY F-box domain 3 101 IPR036047 GO:0005515
Pste8g01250 607 CDD F-box_AtSKIP3-like 3 47 - -
Pste8g01250 607 SMART fbox_2 6 46 IPR001810 GO:0005515
Pste8g01250 607 SMART fbox_2 351 391 IPR001810 GO:0005515
Pste8g01250 607 CDD F-box_AtSKIP3-like 348 392 - -
Pste8g01250 607 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Pste8g01250 607 Gene3D - 342 446 - -
Pste8g01250 607 Gene3D - 2 100 - -
Pste8g01250 607 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 6 254 - -
Pste8g01250 607 Pfam F-box domain 4 43 IPR001810 GO:0005515
Pste8g01250 607 ProSiteProfiles F-box domain profile. 345 391 IPR001810 GO:0005515
Pste8g01250 607 Pfam Phloem protein 2 92 254 IPR025886 -
Pste8g01250 607 Pfam Phloem protein 2 440 604 IPR025886 -
Pste8g01250 607 SUPERFAMILY F-box domain 348 448 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01250 Pste-Chr8 6614875 6624486 Dispersed/Transposed