Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01245 GCAGTTAGGGCTTATTGTTTAAACGCACCTCTATCATTTCATTTCCGTCTTCATCTTGGTGGTGACTGGTCTGAGGCTGAGGCTGAGGCTGAGGCTGAGGCTGAGCTTCCCATAAACCTAAAACCCTAACTGAGAGTTCCATTGAATCTGGGACACTATGAGCTGGAGAACCCTTGCTTCCACTTCTCGACACACTTTCAAGAGACTCAATGCATTCTTACGACCCCCTTCTTCCCCTCACCCACGCGCCTCTTCCTCCCACGCGCCCTTCACCACCGCCCTCCACTCCCCAATGCCCTCATCGACCCAAAACTCCACTCTCCGCATAGCGACGCGGTCTATCAAGACGACGAAACCACGAACGAGTTCTTATCGCGATTTGTGTGGATAATGCGGAAGAAGGTGAAGGAAGCGTACCCGGAGTCCGACAAGGCCACCGTAGACGGCATGCTCGTGGCGATCGTGGAGAGGGTGACATTGGAGATGGAAAAGGGCGGCGGCGGCGGCGGAACTGCCTCTGGGGGCTTCAGCGATGACTTGTGGAGAACGGTGTGGGAGGTGAGCAATTTGGTGTTGGAGGACATGGGCAAGGAGAGGAAGAAGGAGAAAATGAAGGGCTTCTTGCAGTGCGACGATGTTAAGGAAATGTGCAGATTCGCCGGCGAAGTCGGCATTCGCGGCGATTTGCTCAGGGAGCTTAGGTTCAAGTGGGCGCGTGAGAAGATGGAGGAGCATGAATTCTATGAGGGTTTGGAGAGAATAAGGAAAGAGGCACAGAATGAGGGCAAGCAAATCGAGGAGAACAAGAAGGACAATGTTGTTGGACTTCCCAAGAGGAGAGGGAAGATAAGGTACAAGATTCATGGGCTTGATCTATCTGATCCCAAGTGGGCACAAGTGGCTGATAGGATCCATGAGGCAGAGCAAGTGTTTTGGCCTCAGGATCCCAAACCAATTACCGGCAAAGCCAGGATTGTTACCGACAATATTCTTTCGTTGAAGGAGGATCATCATACTTTGCAAACTCTCTTCGCTGACTGGGTCGACCTTGTACAACCTACTAGGCTCGAATGGATGGATTTACTTCACAAATTGAAAGATCAGAATCATGGTTTGTACTTGAAGGTGGCTGAAATGGTATTAACTGAAGATTCTTTCCAAACAAGTGTATCTGACTACTTTAGGCTTATTGATATCTATGCTAAAGAGAACTGCTTTGATGATGTTGAGAGAATTTTGAAGAAGATGAATGAAAATGGTGTAAAACCAGATGCTTCAATAGCGAGTGTGTTGGTCCACATGTACTGCAAGGGAGGCAATCTTGCACGTGCAAATGAAGCATTTGAAGTTTTGAGGAGCCAGGGCTTTGAACCAGACGAACAAGTCTACAACTCAATGATCATGGCCTTTGTGCATAATGGCCAGCTCCTGTTGGGTGAGAAATTGATGAGGGAGATGGAGTTGAAAAATATGAAAATCACAAAGGAAATATACGTTGCATTGCTCCGTTCTTTTTCTCAACTTGGTGATGCTGTTAGAGCCTCTCGAATTTCATCAACGATGTTGTGTGCAGGATTTCAGCATTGTTTGGAGACATGCACCCTGCTTATCGAGGCATGTGCACGTGTTGGTGACTCCAAACATGCAAGAGTCCATTTTGACCACATGATACAATTAGGGCATAGGCCTGATGATAGGTGCACTGCTAGCTTGATTGCAGCTTATGAGAAGAAAGCCAACTTGGACGACGCGTTAAATATTTTATTGAAGTTAGAGAAGGATGGCTTTGAGCCTGGGGTTGCCACTTATTCTGTTCTTGTGGACTGGTTAGGTAAGATGCAGCTTGTTGATGAGGTAGAGCAGCTTCTAAGCAAAATAGCTCTGCTGGGTGAGGCTCCTCCTTTTAAGCTTCAGGTGAGTCTCTGTGATATGTATGCTAGAGCTGGAAATGAGAAAAAGGTCCTTCAAACTCTGGGCGTTCTGGAAGCTAGGAAGGATGAATTAGGACAAGCTGAGTATGAGAGAATTATAAGCGGCCTTATTGATGGTGGGTTTCAGCAGAATGCACAGAGAATATGCGGGATCATGGAAGCACAGGGTTTTGATGCATCGAGGGTTAAGTTTAAACTTTTGAAGCCTGTCTCCAGAGCTCCGAATATGAGATAGTTTAGTGGTCATGAGTAGGACCTTTTCATTTTTTGTCTTTCTCCGTCAAGTGTCCATCAAATCTGCTGCCTCACTAGGGAATCATACTGGGTTTATTATACCATGTAACAAATAAGGATGAGTTTATGCTCGTTAGTTTTTCAATTGTACCGTGTTTATGAATTTTTTCCATGGTTACAGCTTTGCCAGTGCTCAGATTACTGATTTACATTTTTTTTTTCTTTTGATCTTTAGTTGTTTGTATATAAAAATATCTTTTGTGGCATGTTCATGGAATTTTCTTTTTCAC 2455 0.4558 MRKKVKEAYPESDKATVDGMLVAIVERVTLEMEKGGGGGGTASGGFSDDLWRTVWEVSNLVLEDMGKERKKEKMKGFLQCDDVKEMCRFAGEVGIRGDLLRELRFKWAREKMEEHEFYEGLERIRKEAQNEGKQIEENKKDNVVGLPKRRGKIRYKIHGLDLSDPKWAQVADRIHEAEQVFWPQDPKPITGKARIVTDNILSLKEDHHTLQTLFADWVDLVQPTRLEWMDLLHKLKDQNHGLYLKVAEMVLTEDSFQTSVSDYFRLIDIYAKENCFDDVERILKKMNENGVKPDASIASVLVHMYCKGGNLARANEAFEVLRSQGFEPDEQVYNSMIMAFVHNGQLLLGEKLMREMELKNMKITKEIYVALLRSFSQLGDAVRASRISSTMLCAGFQHCLETCTLLIEACARVGDSKHARVHFDHMIQLGHRPDDRCTASLIAAYEKKANLDDALNILLKLEKDGFEPGVATYSVLVDWLGKMQLVDEVEQLLSKIALLGEAPPFKLQVSLCDMYARAGNEKKVLQTLGVLEARKDELGQAEYERIISGLIDGGFQQNAQRICGIMEAQGFDASRVKFKLLKPVSRAPNMR 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01245 591 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 434 468 IPR002885 -
Pste8g01245 591 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 399 433 IPR002885 -
Pste8g01245 591 Gene3D Tetratricopeptide repeat domain 195 346 IPR011990 GO:0005515
Pste8g01245 591 Coils Coil 118 141 - -
Pste8g01245 591 Pfam Pentatricopeptide repeat domain 439 483 IPR002885 -
Pste8g01245 591 Pfam Pentatricopeptide repeat domain 253 293 IPR002885 -
Pste8g01245 591 Gene3D Tetratricopeptide repeat domain 372 585 IPR011990 GO:0005515
Pste8g01245 591 NCBIfam pentatricopeptide repeat 402 434 IPR002885 -
Pste8g01245 591 NCBIfam pentatricopeptide repeat 300 330 IPR002885 -
Pste8g01245 591 NCBIfam pentatricopeptide repeat 266 295 IPR002885 -
Pste8g01245 591 NCBIfam pentatricopeptide repeat 332 363 IPR002885 -
Pste8g01245 591 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 294 328 IPR002885 -
Pste8g01245 591 Pfam PPR repeat 402 430 IPR002885 -
Pste8g01245 591 Pfam PPR repeat 332 360 IPR002885 -
Pste8g01245 591 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 259 293 IPR002885 -
Pste8g01245 591 PANTHER OS07G0661900 PROTEIN 1 579 - -
Pste8g01245 591 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 329 363 IPR002885 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01245 8 6597992 6600718 Pste8g01245 8 6597992 6600718 ECH