Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01226 ATGACAGTGACGAGCGGAGGAGGAGCGGCGGTGGGAGTTCAGATCCACCAGCAACAGAAGCAGAAGCAGCAGCAGCAGCAGGGGAGAACGGTGTTACCGGATTTCCAAAAAAGCGTGAATCTAAAGTACGTGAAATTAGGTTACCACTACTTGATCTCGAACCTTCTGACCCTATTCTTGGTCCCCTTGATCCTGGTGACGCTAATCCAGGTGTGCCAAACGACGGAGCTGGAGCACCTCCGCCACCTATGGGTCCACCTCCAGTACAACCTGATCACCATCTTGACCTGCTCGGCGGTGCTGGTCCTCGGGCTGACTCTCTACGGGGTGACCAGGCCACGGCCCGTGTACCTGGTGGAGTCGGCCTGCTTCCGGGCCGCGGACCACCTGAAGGCCCCCTTCTCGAGCTTCATGAACCACTCCCGGCTGACGGGCGACTTCGAGGAGTCATCCCTGGAATTCCAGAGAAAGATCCTGGAACGGTCTGGGCTTGGGGAAGAGACGTACGTGCCCGAGGCCATGCACTCCATTCCGCCTGAGCCCTCGATGGCCGCGGCCAGGGCGGAGGCCGAACAGGTCATGTTTGGTGCTTTGGATAATCTCTTCCATAACAGCAACCTCAAACCCAAGGATATTGGTATTCTTATTGTGAATTGTAGCTTGTTTAACCCGACTCCCTCCCTCTCTGCCATGATTGTTAATAAGTACAAGCTTAGGGGCAACATTAGGAGCTTTAATTTGGGTGGAATGGGCTGCAGTGCCGGAGTCATTGCTGTTGATCTCGCCAAGGACCTTTTGCAGGTTCATAGGAACACTTATGCTGTCGTTGTTAGCACTGAGAACATAACTCAGAATTGGTACTTCGGCAACAAGAAATCCATGCTCATTCCCAATTGTCTTTTTCGCGTTGGCTGCTCCGCCCTGTTGCTCTCCAACAAGCCCGCTGATCGCCGGAGGGCCAAGTACAGGCTTGTTCACGTTGTCAGGACTCATCGTGGTGCCGACGATAAGGCCTTCCGCTGTGTTTATCAGGAGCAGGATGATGCTGGCAAGACTGGTGTCTCTTTGTCTAAGGATTTGATGGCTATTGCTGGTGGTGCTTTGAAAACCAATATCACCACTCTAGGTCCCTTGGTGCTGCCTATTAGTGAGCAGCTTCTTTTTTTCACCACTTTGTTGATGAAGAAGTTGTTCAAGGCTGATGTCAAGCCTTACATACCCGATTTCAAGCTTGCTTTTGATCATTTTTGCATCCATGCTGGTGGCAGGGCCGTTATTGATGAGTTGGAGAAGAACCTGCAGCTTCTTCCTGAGCATGTCGAAGCTTCTCGCATGACCCTTCACCGTTTTGGCAACACTTCCTCCAGCTCCATTTGGTATGAGTTGTCTTATATTGAAGCTAAAGGGAGGATCAAGAAGGGTAACAGGGTTTGGCAGATTGCTTTTGGAAGTGGTTTCAAATGTAACAGTGCTGTTTGGCAGGCCCTCAGAAATGTCAGGCCTTCGCCGAATGGACCATGGGAAGATTGCATTGATAAGTATCCTGTGGAAATAGTCACATAA 1563 0.5138 MTVTSGGGAAVGVQIHQQQKQKQQQQQGRTVLPDFQKSVNLKYVKLGYHYLISNLLTLFLVPLILVTLIQVCQTTELEHLRHLWVHLQYNLITILTCSAVLVLGLTLYGVTRPRPVYLVESACFRAADHLKAPFSSFMNHSRLTGDFEESSLEFQRKILERSGLGEETYVPEAMHSIPPEPSMAAARAEAEQVMFGALDNLFHNSNLKPKDIGILIVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDLLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGCSALLLSNKPADRRRAKYRLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFTTLLMKKLFKADVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELSYIEAKGRIKKGNRVWQIAFGSGFKCNSAVWQALRNVRPSPNGPWEDCIDKYPVEIVT 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01226 520 PANTHER 3-KETOACYL-COA SYNTHASE 85 517 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste8g01226 520 Gene3D - 122 495 IPR016039 GO:0016746
Pste8g01226 520 FunFam 3-ketoacyl-CoA synthase 126 495 - -
Pste8g01226 520 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 413 494 IPR013747 -
Pste8g01226 520 CDD CHS_like 98 493 - -
Pste8g01226 520 Pfam FAE1/Type III polyketide synthase-like protein 110 397 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pste8g01226 520 SUPERFAMILY Thiolase-like 103 320 IPR016039 GO:0016746
Pste8g01226 520 PIRSF Very_long_ch_3-ktacl-CoA_syn 34 520 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste8g01226 520 SUPERFAMILY Thiolase-like 325 494 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01226 Pste-Chr8 6496264 6497826 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01226 8 6496264 6497826 Pste8g01226 8 6496264 6497826 ECH