Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01214 AAAACTTGAATTGAACTTCTCGGTCTCGCTGGCTTTGTTCCTCTGATGGTGTTGGCCGCTGCAGAGCGCTCCCAAAGAGATCTATGAACTAAAAAGTAAAAACCATGCACATGCACCCTTCACTTCACTCTCTATTATTCAGTAACAAATTAACAACACATAGATAGCTACTATTACGACACACGCATAATCTCCATTTTCTGCGCCAAAAATGTCCATATCAATATCACTATCCTCAGTCCCAGCTCGTCTCACACTCCTCGCTCTCTTCTCCGCTACCACCTTCTACTGCCTCTACAAATCTCGCCGCTTAAGACTCCTCAAACTATCCCTAAACCCTAATCCTAACCCTAACCCTAACCCTAACCCTAACCCTAAGATTATCTTCCTCTCAGAAACTGGCACCGCCAAATCCCTCGCTGGCCGCCTCCACCGCCTCCTTGCCTCCAACGACGTCGCATTCGACCTCGTCGATTCGCAGCACTACGAACCCGAGGACCTCCCCAAGGAGACACTCCTCCTCCTCGTCGCCTCCACGTGGCAGGACGGCGCTCCCCCCGCTGCCTCCCGCTTCTTCGCCACGTGGCTCGCCGATGCAGCCGCCGACTTCCGCGCCGGCTCCCTCCTCCTCTCGCGCTGCCGATTCGCCGTCTTCGGCCTCGGAAGCCGAGCCTACGGCGAATCCTTCAACGCCGTCGCGAGGGGCCTCGCCAAGCACCTGAGGGCGCTCGGCGCAACGGAACTCATTCCACTTTCCCATGGGGATGTTGATTCTGCTGACGTGGATGCGGTGTTCGGTCGCTGGTGTGAGAAGGTCGTTTCGGTATTGAAAGGTGGTGATGTTGTCGAAAGCTGCGATAATGATGATGATGACGGTATTGTTTCGAGTTCCGAAGAGGAGTCTGATGTGGAGAGTAGTGATATTGTTGATCTGGAGGACATTGCTGGTAAAGCTCCTTCGCGGCGCAAGACGGTGGTTAATGGGGAAGAGCGCAATGCCAAATTGAATGGCACGAAAGAAATGGTGACTCCGGTGATTCGAGCAAATTTAGAGAAGCAGGGATATAAAATTATTGGTTCACATAGCGGTGTCAAGATTTGTAGATGGACCAAGGCACAGCTTCGAGGTAGAGGTGGTTGCTATAAGCACTCATTTTACGGAATTGAGAGTCATAGATGCATGGAGGCAACCCCTAGCTTGGCATGTGCAAATAAATGTGTTTTCTGCTGGAGGCATCACACAAATCCAGTAGGGAAAAGTTGGCAGTGGCAGATGGATGATCCAATAGAGATTGTAAATTCTGCAATAGAGCTGCATACAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTCTCCTTGGAGCGATTAACTGAAGGTCTCTCACCACGTCATTGTGCATTATCTCTTGTTGGTGAACCTATTATGTATCCAGAGATAAATGCACTTGTGGATGAGCTGCACAAAAGGAGGATTTCCACTTTTCTAGTTACAAATGCACAATTTCCTGAGAAAATTAAGTCTCTGAAACCTGTCACCCAGTTATATGTTAGTGTAGATGCTGCAACGAAAGACTCTTTGAAGGCAATTGATAGACCTCTCTTTGGGGATTTCTGGGAGCGATTCATTGATTCCTTGACTGCTCTAAAGGAAAAGCATCAGCGAACTGTATACCGCCTGACCTTGGTGAAAGGTTGGAATACTGAAGATGTTGATGCTTATTCTAAGCTCTTTAGTTTAGGAGAACCTGACTTTGTTGAAATCAAGGGAGTTACATATTGTGGCTCGTCTACTACATCAAAATTGACAATGGATAATGTCCCTTGGCATACTGATGTGAAAACTTTTTCTGAGGCCCTAGCTTTGAAAAGCCAAGGAGAGTATGAAGTTGCATGTGAGCATGCTCACTCGTGTTGTGTCCTCTTAGCAAAAACTAACAAGTTCAGAATTGATGGCCAGTGGTATACATGGATAGACTATGAAAAATTTCACGATCTGGTGGCATCCGGAAAAACTTTTGACAGTAGAGATTACATGACTGCCACACCATCATGGGCCTTCTATGGATCGGAGGAAGGTGGATTTGATCCAGGGCAATTGAGATACAGGAAAGAGAGACATCACAAGTCAAGCCGCAATCAATAAGGTCAGATATTTAAGAGCCTTTGACAGCCAACATTCATTTTCCTGTTGATCTTTTTTCTTCAGTGTGTATAACTCTAGGTTATACAACATACTTCAATAGGATAGTTTTGTAATACATTGCTTCGCATACGTAGGTTAGTACCTTTTCAGTGTATTTAAGCCCCAATTTTTTCCCGATTGGCAGTACATTTTTTTTTATTTATTTACTACAAATAGTACTTTTGGATGTCAATGTTGCAGTTGCAGAAGCAATTTTTTGAGATTGAGATCAGAAGAACATGTTTGAACTTTTGCTGCATTAAGCATTGCTTAGTGTTGCTCTGTTGTAATATTTTAGCAAATTCCTTCGGTTGGTATTTCGGGAATGGAAGATAAGTTGGAAATTTATAATAAAATGCAAACATGCAGAATGTGTAAATCTCAACGTAATGCTAACTCCTATTTTCTTCAAGAGTTAAATAGTAATGTAAAAGTTTTAAAATATTATTGTCAATAGTTAATGTAGA 2652 0.4434 MSISISLSSVPARLTLLALFSATTFYCLYKSRRLRLLKLSLNPNPNPNPNPNPNPKIIFLSETGTAKSLAGRLHRLLASNDVAFDLVDSQHYEPEDLPKETLLLLVASTWQDGAPPAASRFFATWLADAAADFRAGSLLLSRCRFAVFGLGSRAYGESFNAVARGLAKHLRALGATELIPLSHGDVDSADVDAVFGRWCEKVVSVLKGGDVVESCDNDDDDGIVSSSEEESDVESSDIVDLEDIAGKAPSRRKTVVNGEERNAKLNGTKEMVTPVIRANLEKQGYKIIGSHSGVKICRWTKAQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWQMDDPIEIVNSAIELHTNMIKQMKGVPGVSLERLTEGLSPRHCALSLVGEPIMYPEINALVDELHKRRISTFLVTNAQFPEKIKSLKPVTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDVDAYSKLFSLGEPDFVEIKGVTYCGSSTTSKLTMDNVPWHTDVKTFSEALALKSQGEYEVACEHAHSCCVLLAKTNKFRIDGQWYTWIDYEKFHDLVASGKTFDSRDYMTATPSWAFYGSEEGGFDPGQLRYRKERHHKSSRNQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01214 644 Gene3D Aldolase class I 254 586 IPR013785 -
Pste8g01214 644 ProSiteProfiles Flavodoxin-like domain profile. 55 203 IPR008254 GO:0010181
Pste8g01214 644 SFLD tRNA wybutosine-synthesizing 267 579 IPR034556 GO:0008033|GO:0051539
Pste8g01214 644 PRINTS Flavodoxin signature 104 115 IPR001094 GO:0010181
Pste8g01214 644 PRINTS Flavodoxin signature 167 186 IPR001094 GO:0010181
Pste8g01214 644 PRINTS Flavodoxin signature 142 152 IPR001094 GO:0010181
Pste8g01214 644 PRINTS Flavodoxin signature 56 69 IPR001094 GO:0010181
Pste8g01214 644 SFLD Radical SAM 267 579 IPR007197 GO:0003824|GO:0051536
Pste8g01214 644 CDD Radical_SAM 328 504 - -
Pste8g01214 644 FunFam S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 260 588 - -
Pste8g01214 644 ProSiteProfiles Radical SAM core domain profile. 316 559 IPR007197 GO:0003824|GO:0051536
Pste8g01214 644 Pfam Flavodoxin 57 188 IPR008254 GO:0010181
Pste8g01214 644 Gene3D - 44 214 IPR029039 -
Pste8g01214 644 SUPERFAMILY Flavoproteins 54 206 IPR029039 -
Pste8g01214 644 MobiDBLite consensus disorder prediction 624 644 - -
Pste8g01214 644 SUPERFAMILY Radical SAM enzymes 329 509 - -
Pste8g01214 644 Pfam Radical SAM superfamily 328 506 IPR007197 GO:0003824|GO:0051536
Pste8g01214 644 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 42 641 IPR034556 GO:0008033|GO:0051539
Pste8g01214 644 Pfam Wyosine base formation 511 574 IPR013917 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01214 8 6426175 6431025 Pste8g01214 8 6426175 6431025 ECH