Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01180 GGACAATTGGAGGAACCCCGATCCTCGTGACTCGTGCCTCCGTTGCTCATTCCCTCAAGTTTAAATTCCCTGCGACGTGCACACGCTATTCACCACTGCCGGAGAATGGCCTCCGACGTAGCAACTTCGGCGGCGACGAGTCGGAGAAAGCCGTCGTGGAGAGAAAGAGAAAACAACAGAAGAAGAGAAAGAAAGCGAAGAGCAATAGCAGCGAAAATATACTCAGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGCGACAACAACGAAGTTCTCAAAGCTCTTTGCGCGGAAGCTGGTTGGTACGTTGAAGAAGACGGAACCACTTATCGCAAGGGTTGCAAGCCACCTCTGGCCAATGGTGCAGGGAGCTCCATGAGAAACATTCCCTTTTCTTCTTCACAGAATCCAAGTCCTCTTTCTTCGTCGTTTCCCAGCTCAATTCCTTCATACCAAGTGAGCCCTTCGTCCTCCTCTTTCTCGAGCCCGTTTCGTTTAGACGGGGATAAGGACAACGTATCTAACCTCATTCCATACATTCGCAATGCATCCCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCACTTTCGTCACCAACGTTAAGAAATCCGAAACCAATTCCTACATGGGAGTCTATTGCCAAAGAATCCATGGCCTCCTTCAATTACCCTTTCTTTGCGGCTTCTGCCCCCGCTAGCCCCACACACAATCACCTTTACACCCCGGCCACTATTCCAGAATGCGACGAGTCTGATACTTCCACCGGTGAGTCTGGCCAGTGGGTGAAATTCCAAGCATTTGCTCCTGCATCCGCATTTCCAACTTCACCAACCTTCAATCTTGTTAAACCTCTGGTTCCGCAAGGGGCACAGGATAATTCAATCCAAGCCATGAGGATGAGTTCAGATGAGTTTGGGGCACAGGTAAAGCCTTGGGTTGGGGAAAAAATTCATGAAGTGGCAATGGACGATTTGGAGCTAACACTTGGAAGTGGGAAGGTTGGACAGAGTTTGGTGAAACCCTCGCCCGAAACCAATTAAAATTATTTGGGTTATGATAATTATGTTAAGTTGGGTTTATGCAATTTTTTAAAAAAATAGCTGGGTTAATTGGGTCGAAC 1148 0.4852 MASDVATSAATSRRKPSWRERENNRRRERKRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWYVEEDGTTYRKGCKPPLANGAGSSMRNIPFSSSQNPSPLSSSFPSSIPSYQVSPSSSSFSSPFRLDGDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTLRNPKPIPTWESIAKESMASFNYPFFAASAPASPTHNHLYTPATIPECDESDTSTGESGQWVKFQAFAPASAFPTSPTFNLVKPLVPQGAQDNSIQAMRMSSDEFGAQVKPWVGEKIHEVAMDDLELTLGSGKVGQSLVKPSPETN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01180 320 MobiDBLite consensus disorder prediction 1 31 - -
Pste8g01180 320 MobiDBLite consensus disorder prediction 89 115 - -
Pste8g01180 320 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 151 IPR008540 -
Pste8g01180 320 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 7 307 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pste8g01180 320 MobiDBLite consensus disorder prediction 93 115 - -
Pste8g01180 320 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01180 Pste-Chr8 6248663 6250449 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pste8g01180 BES1_N 1.7e-59 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01180 8 6248663 6250449 Pste8g01180 8 6248663 6250449 ECH
Pste8g01180 8 6248663 6250449 Pste2g00859 2 9221569 9223846 PCT