Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01174 CCCCCTTTCCCATTCTCATTCTACAACTTCCCATTCTTCCTTCTTTCTTATCTATCAAAATCATGCGCTTCAACTCAAACTCCAAAACCTCTCCACCCTTCCACCTCCTCCTCTTTTTATTAGGCAATGTAGCATCTGCTACAGTGTTCACTCTCGAAAACCATTGCAGTTACACAGTATGGCCGGGGACACTTTCCGGCAACGGCGCGGCCGTTCTCGGCGACGGTGGGTTTGTCCTGGAGCCCGGTTCATCAGTCCAGCTGACCGCACCGGGCGGGTGGTCGGGGCGGTTCTGGGCCCGGACCGGGTGCAGCTTCGAGGGCTCCGGCGGCGGAAAATGCGAGACAGGGGACTGCGCGGGGGGGCTGAGGTGCAGCGGCGGAGGAGTGCCGCCGGTGACGCTGGCGGAGTTCACAATCGGAAGCGCTGGTAACGGCAACAAGGACTTCTACGACGTGAGCCTGGTGGACGGTTACAACGTGGGCATGGGTGTACGGGCTACCGGGGGAACCGGTGACTGCCAGTACGCGGGGTGCGTGGCCGACCTGAACGGCGCGTGTCCGGCTGAGCTGCAGGTGAGGGACGGCGGCGGCGGTGTGGTGGCGTGCAAGAGCGCTTGTGCGGCGTTCAACACGGCGGAGTTTTGCTGCACCGGAGAGCACTCTACGCCGCAGACATGTTTGGCGACTCATTATTCGGAGATATTCAAGAATGCTTGTCCTTCCGCCTATAGTTACGCTTACGATGATGCTTCCAGCACTTGCACTCCCTACATCCCCATTTTTCCATCCTCACTTCAATTTGTTGCATTCCCAACCGCGTTTCTTTCCTTATCTAACTCGTTTCTCACTTTCTCCATCAAAATCATGGCCCTAAATCCAAATTATTCCAAAACCTCTGCATTTTTTCACCTGCTCCTCTTCTTATTAGGTAACGGAGCATCTGCCACATTATTCACACTCGAAAACCATTGCAGTTACACAATTTGGCCGGGGACACTTTCCGGCAACGGCGTCACTCTCGGCGGCGGCGGTTTTCCTCTGGCACCGGGTTCAACGGTTCAACTCACCGCACCGTCCGGGTGGTCAGGCCGCTTCTGGGCCCGAACCGGTTGCAGCTTCGACGGGTCCGGCAACGGAAAATGCTTAACGGGGGACTGCGCCGGAGGACTGAGATGCACCGGCGCAGGTGTTCCGCCGGCGACGCTAGCGGAGTTCACGGTGGGATCCGCCGGGAACGGCAACAAGGACTTCTACGACGTGAGTCTGGTGGACGGTTACAATGTTGGCGTGGGTGTACGGGCTACCGGAGGAACCGGTGACTGCCGGTACGCGGGGTGCGGGGCGGACCTGAACGCGGCGTGTCCGACGGAGTTGCAGGTTAGGGACGGCGGCGGCGCGGTGGTGGCGTGCAAGAGCGCGTGTGCGGCGTTCAACATGGCGGAGTTTTGCTGCACCGGCGAACACTCGACGGCGCAGACGTGTTTTCCGACTCTTTATTCGAGGATTTTTAAGAGCGCGTGTCCCGCTGCCTACAGTTACGCTTACGATGATGCTTCCGCCACTTTCACCTGTTCTGCATCTGATTACGTTATCACCTTTTGCCCTCCGCCATCCTCTTATCGTTAATTTCTTCAAAGAAAAACATTCCCACAAATTATTTACTACTATGTAGATGTCTACCTCGTTTGCTTGTCCTTTTCAATTACGACGTTATTCTTGTTAGTTTAGTGCAGA 1736 0.5651 MRFNSNSKTSPPFHLLLFLLGNVASATVFTLENHCSYTVWPGTLSGNGAAVLGDGGFVLEPGSSVQLTAPGGWSGRFWARTGCSFEGSGGGKCETGDCAGGLRCSGGGVPPVTLAEFTIGSAGNGNKDFYDVSLVDGYNVGMGVRATGGTGDCQYAGCVADLNGACPAELQVRDGGGGVVACKSACAAFNTAEFCCTGEHSTPQTCLATHYSEIFKNACPSAYSYAYDDASSTCTPYIPIFPSSLQFVAFPTAFLSLSNSFLTFSIKIMALNPNYSKTSAFFHLLLFLLGNGASATLFTLENHCSYTIWPGTLSGNGVTLGGGGFPLAPGSTVQLTAPSGWSGRFWARTGCSFDGSGNGKCLTGDCAGGLRCTGAGVPPATLAEFTVGSAGNGNKDFYDVSLVDGYNVGVGVRATGGTGDCRYAGCGADLNAACPTELQVRDGGGAVVACKSACAAFNMAEFCCTGEHSTAQTCFPTLYSRIFKSACPAAYSYAYDDASATFTCSASDYVITFCPPPSSYR 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01174 521 ProSitePatterns Thaumatin family signature. 357 372 IPR017949 -
Pste8g01174 521 ProSiteProfiles Thaumatin family profile. 295 515 IPR001938 -
Pste8g01174 521 FunFam Thaumatin-like protein 1a 27 242 - -
Pste8g01174 521 Pfam Thaumatin family 33 235 IPR001938 -
Pste8g01174 521 Pfam Thaumatin family 302 515 IPR001938 -
Pste8g01174 521 CDD TLP-PA 298 514 - -
Pste8g01174 521 PRINTS Pathogenesis-related protein signature 297 309 IPR001938 -
Pste8g01174 521 PRINTS Pathogenesis-related protein signature 323 332 IPR001938 -
Pste8g01174 521 PRINTS Pathogenesis-related protein signature 357 386 IPR001938 -
Pste8g01174 521 PRINTS Pathogenesis-related protein signature 505 514 IPR001938 -
Pste8g01174 521 PRINTS Pathogenesis-related protein signature 344 355 IPR001938 -
Pste8g01174 521 CDD TLP-PA 28 235 - -
Pste8g01174 521 ProSitePatterns Thaumatin family signature. 89 104 IPR017949 -
Pste8g01174 521 ProSiteProfiles Thaumatin family profile. 26 235 IPR001938 -
Pste8g01174 521 SUPERFAMILY Osmotin, thaumatin-like protein 28 235 IPR037176 -
Pste8g01174 521 FunFam Thaumatin-like protein 1a 296 515 - -
Pste8g01174 521 Gene3D Thaumatin 296 515 IPR037176 -
Pste8g01174 521 Gene3D Thaumatin 27 237 IPR037176 -
Pste8g01174 521 SUPERFAMILY Osmotin, thaumatin-like protein 297 516 IPR037176 -
Pste8g01174 521 PANTHER OS03G0233200 PROTEIN 284 515 IPR001938 -
Pste8g01174 521 SMART tha2 29 242 IPR001938 -
Pste8g01174 521 SMART tha2 298 515 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01174 Pste-Chr8 6182412 6189618 Transposed