Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01162 TCTCTCTCTCTCTCTCTCTCTGGCGTTTCTACCCAACCGCGTACTCTACGTATGACTCCGCCCGCGATCAACGATAATGAATTAACCCACAAAAATAAAAATAAAACTCTCTTCTCCTCTTTCGTAAAGAAACTTTTCTGCTTTTTTTCTTAGCCTTTGGGGGTCTCCTTGGGGAGAAGGCACGAAGGACGACCCCACCTCCCAATTCTTCTATTCTCCGTTTTCCTTCGTCCTTCTTCTCCTCTTTCATTTTTCTTTCCTTTCCTCGTTTCTTCTATTCTTTTGACTTTCAAATCGCGTGCCCTTCTCATTCATTCACTCCCTGCAAATATCAATTTTCAATCATCTCCCTTTCCCATTCTTTTTTGAATTATTCCTCTTTTTCGTACTCTCCTCTTTTCCCTAACACCAACACACGCAAAAAAAAAATAAAAAAAATTATAACAAACTTCACAAAATTGTTCTACACTTGCCAATTATTGTTAGATCACACACTTCGCAGTTCGCACAAACAACCACTCGCTTATGTCCTTCAATTGACCTCGATTCTTCCGCCATTTGTTAAAAGGAGTTTTTTCTTTTTCTTTTTTTTCTCAGTATGAAGTTATAACGATTTGAGTACGTGAATGGGTTGGCTTAGCAGAATTTTTAAAGGCTCCGACCAGAAGATTTCGGAAGAGCATTATTATAAAGAGGATACTGGCTTTTATGTGCCATCCCCTTCAGGGGATGTTTGGAATCAGAACGAGAATGAAGATATAGATCGTGCTATTGCACTGTCTCTGGTGGAAGAGAATAAAAAAACAAACAATGTAAATGACTACAGATCGCAATTAGAAGAAGATGAACAACTGGCCAGAGCTATAGAAGAAAGTCTAAATCTAGAATCTCCTCCCATATATGGAAATGAAAATGTGTATCAACCAATTCAGTATTTCCCCTTGGGATCCAGGATTTGTGCTGGCTGCTATACTGAGATTGGTTATGGACGATATCTAAATTGCTTGAATGCATTCTGGCATCCTGAATGCTTCCGCTGCCGTGCTTGCAACCTACCAATCTCTGATTATGAGTTCTCCACATCTGGGAATTACCCTTACCATAAATCATGCTATAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAGCACTTTATTCCTACAAATCCTGCTGGTCTTATTGAATACAGGGCTCATCCATTCTGGATCCAGAAATATTGCCCTTCTCATGAACATGATGGTACTCCTCGCTGTTGCAGTTGTGAGCGAATGGAGTCACAAGAAGCAGGATATATTGCTCATAAGGATGGCCGGAAGCTCTGCTTAGAGTGTCTGGATTCTGCTATCATGGATACTAATGAATGCCAACCCCTTTATGCCGATATACAAAGATTTTATGAAAGCCTAAATATGAAACTGGACCAGCAAATTCCACTACTATTGGTTGAACGACAAGCACTGAATGAAGCAAGAGAGGGAGAGAAGAATGGTCACTATCACATGCCGGAAACTAGAGGACTCTGCCTCTCAGAGGAGCTCAGCACTGTAATTGTATTTAAACTTGATCAGTTCTCGAGACGACCTAGAATTGGGACAGGAAATGGAGCAATGGACATGAGAGCACAGCCATACAGACTGACTCCACGCTGCGATGTGACAGCAATTCTCATTTTATATGGTCTTCCAAGGTTGCTTACTGGATCAATCCTAGCTCATGAGATGATGCATGCATGGCTGCGACTTAAAGGTTATCGGACTCTAAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCATATGTGGTTGGAGTCGGAACTTTCTTCTGCATCAGGAAGCAACTTTGTATCAGCCTCATCCTCATCTTCATCATCATCCTCATCCTCATCACATACATCTAGAAAAGGTAAAAGACCTCAGTTTGAGAGGAAGCTTGGGGAATTCTTCAAGCACCAGATTGAATCAGACATTTCCCCTGTTTATGGAGATGGGTTTAGGGCAGGTCAAAAAGCAGTGCGCAAGTATGGTTTGCAAAGGACCCTTCACCATATCAGAATGACGGGGACTTTTCCATGTTAAGTACAGAGATCCCCCATTTAACAGATTGTTTCTCATTCTTTCTAAATATAAAGCCTGGCCAGTTATTATTAGAAAACGAGGCCAAGGTGCTTAGGCATTAGCTTCGACGAATTGGTGATTTTTTTGTACTTGTAATTATTGATACCGTTGCGGATATATTATTGATTACCTTCACATTTTTTTTTAATCTATCAGTGCTACTTTTTGGCA 2294 0.4071 MGWLSRIFKGSDQKISEEHYYKEDTGFYVPSPSGDVWNQNENEDIDRAIALSLVEENKKTNNVNDYRSQLEEDEQLARAIEESLNLESPPIYGNENVYQPIQYFPLGSRICAGCYTEIGYGRYLNCLNAFWHPECFRCRACNLPISDYEFSTSGNYPYHKSCYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWIQKYCPSHEHDGTPRCCSCERMESQEAGYIAHKDGRKLCLECLDSAIMDTNECQPLYADIQRFYESLNMKLDQQIPLLLVERQALNEAREGEKNGHYHMPETRGLCLSEELSTVIVFKLDQFSRRPRIGTGNGAMDMRAQPYRLTPRCDVTAILILYGLPRLLTGSILAHEMMHAWLRLKGYRTLSQDVEEGICQVLAHMWLESELSSASGSNFVSASSSSSSSSSSSSHTSRKGKRPQFERKLGEFFKHQIESDISPVYGDGFRAGQKAVRKYGLQRTLHHIRMTGTFPC 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01162 485 ProSitePatterns LIM zinc-binding domain signature. 111 145 IPR001781 -
Pste8g01162 485 SMART uim 71 90 IPR003903 -
Pste8g01162 485 SMART uim 40 59 IPR003903 -
Pste8g01162 485 MobiDBLite consensus disorder prediction 411 432 - -
Pste8g01162 485 MobiDBLite consensus disorder prediction 411 427 - -
Pste8g01162 485 FunFam Protein DA1-related 1 105 164 - -
Pste8g01162 485 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 104 136 - -
Pste8g01162 485 ProSiteProfiles LIM domain profile. 109 169 IPR001781 -
Pste8g01162 485 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 71 90 IPR003903 -
Pste8g01162 485 SMART lim_4 110 162 IPR001781 -
Pste8g01162 485 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 137 191 - -
Pste8g01162 485 PANTHER PROTEIN DA1-RELATED 2 3 484 IPR045218 -
Pste8g01162 485 CDD LIM_DA1 111 163 - -
Pste8g01162 485 Coils Coil 63 83 - -
Pste8g01162 485 Gene3D Cysteine Rich Protein 106 170 - -
Pste8g01162 485 Pfam Protein DA1 261 480 IPR022087 -
Pste8g01162 485 Pfam LIM domain 111 165 IPR001781 -
Pste8g01162 485 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 40 59 IPR003903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01162 Pste-Chr8 6088544 6096015 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste8g01162 DA1-like 5.1e-97 CL0126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01162 8 6088544 6096015 Pste8g01162 8 6088544 6096015 ECH