Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01123 CCACGTAGGATTTCCTTTGTGGTAACGTCACAGAGACAGGAGACACCACCAGGCACCAGCCTCAGCAGTCCAGTGCCAATGATAAGAGACGAAAGCGTGGGTTCCATAAGCGCCAGGCACAGCGCAGCCACCCCCACCGTCTACAACAAGGTTCTCGTTGCCGTTAAGGCCGAGAAGGTCATCTCCAACACCGCATTAGCCTGGGCTCTCACTCATGTTGTTCACTCCAGCGACTCCATCACGCTTCTTGCCGTTTACTCTGCTCACAAAACCGGCAGAAGGTTCTGGAATTTTTCGAGACTGGGCGGAGACTGTACGAACGGACCGGCGGGAAAGTTGCCGGAACAAATTTCCGTTATCTCCGATTCTTGTGCTCAGATGGTGCTTCAGTTGCATAATCAAATTGAGGTCAGGGTGAAGATTAAGGTGGTCACGGGTACTCCCAGTGGTGCTGTGGCGGCTGAAGCTAGATGGAGCGGTTCCCATTGGGTCATTCTGGACAAGAAATTAAAGCAAGAGGTAAAGCATTGCATGGATGAACTCAACTGTAGCATTGTGGTAATGAATGGGTCACAGGCAAAAATCCTCAGGCTTAACTTAGGGTCTTCAGATGAACTCCAAACTCCTTTTTTCTCTGCTACTTCTTCACCGGGCATTGAAATTGGAAAGCTAAAAGGCAGACGATTGAAGCATTCTACCCCAGCGAGTAGCCCTGAGGAAGAAGGTACTTCTGTTACTAGAAACATAGGAGTAAATTCAGTGTCAAGTTCTGATTCGACGAGTTCTCTTTTCTTAGTCTATGAACAAAACCCTCTGTACGAGGGCAAGGGCCCAGAGAAAAAAACATACAAATCGATCAACGAACCAAAAAATTTTAACGTGCAGCCACCGTTATACTTTGATTTTGAAAGAGATCGTTCTCCCCCTTCATGGACACGTCCAACATCGTCTGTGGCCAGTGATAACAAGACTATATTTTGGATTCCACAAAACCACATTGTAGAAGAGAAGTTTCAGAAAACTAAAAACAACAATGTTATCCTAAGAACCAAATCTCCAACTTCGAAAACTTTACTTGAGAATTTTATACGTTGTGATCAAGAGATGAGGACAAATGAACATGAGTTTGACCAAGCTCAAAGTAGAAGTTATGTCCCCCACTCCGGCATCAGAGATAATTCCATTCCTGTGGGCAGAACAACCTCTGTACCTCCCCCCTTATGCTCACAGTGTCAGAATAAAGCACCTGTATTTGGAAAACCTCCAAAACGCTTTTCTTACAAAGAGATAGAGGAAGCTACTGAGATGTTCTCAGATGTTAACTTTTTGGCTGAGGGTGGATTTGGTGTGGTCCACAAAGGAATACTTAAAGATGGCCAGGTTGTTGCAGTGAAACAGTTGAAGTTCGGTGGTTCTCAAGCAGATATAGATTTCTGCAGGGAAGTTCGGGTTTTGAGTTGTGCACAACACAGAAATGTTGTCTTGTTGATAGGATTTTGTATAGAGTGCAATTTGAGGATATTAGTCTATGAGTACATATGCAATGGATCCTTGGACCTCTACTTATATGGGGATGTGAGTATGTCTTTGGATTGGAACTCACGCTTAAAGATAGCAATTGGAGTTGCACGAGGCTTACGCTACCTTCATGAAGATTGTAGAGTTGGCTGTATAGTGCACAGAGACCTTCGACCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTAGTGGCTGATTTTGGGCTTGCAAGATGGCACTCAGAATGGAATATAGATACTGAAGATCGCGTTATAGGAACTTCAGGGTATCTTGCACCAGAGTATCCTGACGCTGGAAACCTTACATATAAAGTAGACGTATATGCATTTGGAATTGTATTATTGGAGTTAGTAACAGGTAGAAGAATTAGGGAGTTGGAACAGTTCAATGGACACTCATATCTTACTGAATGGTTTCACCCTCTACACATGTTAGAGCCCAGTCATATCTTACAAAACGTTCGATCACTCAAGCCAGGCTTCGATTCTGAGGAGTCATTGGAATTTAATCTTCAATTGCAAGCCATGGCACGAGCTGCTTCGTTATGTCTACGTGTGGATCCTGATGCCAGACCCCCAATGTCAAAGATCCTGAGAGTGCTGGAAGGGGGTGATCCAGTTCGTCCTATGGGTTTAGACATCAATTCGGTTGGTAACACAAGTGGTCATTTAAGTGGTTTGAAGTCGCACTGTACTCCACCTCAAGGTACAATAAGTCATTCTCGTAGACTATCACATTGATCATTCCTTCGGCTCTTGGCTAGCTAGAGAATCTATTGTTGGCAATATAGTTCTGTCTGTGAGCTGCATGGGATCAATTGTCCTTTTGAAGCGTGGGCCTCTCTCCTGCACTTACAGAAACTTGCATACAAGCACAGCACTTGGTGCTAAGAACAAAGCAAGAAATCATTATCTCTTCCTTTGTCATTAAAAAATAGAAACTTGACAATTAGTTTGCTTTCTATATTTTTGCCATTACATTATCTATGTTGTCCATTTGCATTTCCTTGGTGGTTATACTTATATCTGTATATACCCATAAAGAAAAGGGAAAGAAAGACGCTAGTTGGCTTTCATCTTTTATTTTTTTGTCATCCTCTCAACGTAGTTAAATGGCAGTGCTCCATACAATC 2675 0.4325 PRRISFVVTSQRQETPPGTSLSSPVPMIRDESVGSISARHSAATPTVYNKVLVAVKAEKVISNTALAWALTHVVHSSDSITLLAVYSAHKTGRRFWNFSRLGGDCTNGPAGKLPEQISVISDSCAQMVLQLHNQIEVRVKIKVVTGTPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCSIVVMNGSQAKILRLNLGSSDELQTPFFSATSSPGIEIGKLKGRRLKHSTPASSPEEEGTSVTRNIGVNSVSSSDSTSSLFLVYEQNPLYEGKGPEKKTYKSINEPKNFNVQPPLYFDFERDRSPPSWTRPTSSVASDNKTIFWIPQNHIVEEKFQKTKNNNVILRTKSPTSKTLLENFIRCDQEMRTNEHEFDQAQSRSYVPHSGIRDNSIPVGRTTSVPPPLCSQCQNKAPVFGKPPKRFSYKEIEEATEMFSDVNFLAEGGFGVVHKGILKDGQVVAVKQLKFGGSQADIDFCREVRVLSCAQHRNVVLLIGFCIECNLRILVYEYICNGSLDLYLYGDVSMSLDWNSRLKIAIGVARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWHSEWNIDTEDRVIGTSGYLAPEYPDAGNLTYKVDVYAFGIVLLELVTGRRIRELEQFNGHSYLTEWFHPLHMLEPSHILQNVRSLKPGFDSEESLEFNLQLQAMARAASLCLRVDPDARPPMSKILRVLEGGDPVRPMGLDINSVGNTSGHLSGLKSHCTPPQGTISHSRRLSH 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01123 760 MobiDBLite consensus disorder prediction 226 257 - -
Pste8g01123 760 ProSitePatterns Tyrosine protein kinases specific active-site signature. 558 570 IPR008266 GO:0004672|GO:0006468
Pste8g01123 760 Gene3D HUPs 36 205 IPR014729 -
Pste8g01123 760 SUPERFAMILY Protein kinase-like (PK-like) 417 715 IPR011009 -
Pste8g01123 760 PANTHER OS01G0750732 PROTEIN 178 717 - -
Pste8g01123 760 MobiDBLite consensus disorder prediction 236 257 - -
Pste8g01123 760 SMART tyrkin_6 437 715 IPR020635 GO:0004713|GO:0006468
Pste8g01123 760 Gene3D Phosphorylase Kinase; domain 1 405 512 - -
Pste8g01123 760 MobiDBLite consensus disorder prediction 378 396 - -
Pste8g01123 760 MobiDBLite consensus disorder prediction 376 396 - -
Pste8g01123 760 ProSiteProfiles Protein kinase domain profile. 437 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste8g01123 760 Gene3D Transferase(Phosphotransferase) domain 1 513 720 - -
Pste8g01123 760 FunFam Os07g0541700 protein 513 601 - -
Pste8g01123 760 MobiDBLite consensus disorder prediction 737 760 - -
Pste8g01123 760 Pfam Protein tyrosine and serine/threonine kinase 443 712 IPR001245 GO:0004672|GO:0006468
Pste8g01123 760 MobiDBLite consensus disorder prediction 7 26 - -
Pste8g01123 760 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 409 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01123 Pste-Chr8 5865058 5872636 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pste8g01123 PK_Tyr_Ser-Thr 3.3e-39 CL0016