Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01111 ATGTGCGATGATCAAAATGAAGTAAATTCTGGGAAATTAAAAAAATCAGACGCAGTGGTGTTGAGAAGTGGCAACGCATTACACTTGTTCGAATCAAGAACGAAGAAAGAGAGAAATAGGGCTTCATTCATGGGCTGTGACTGTGGGGGGAAGTTGAATGTCAGAAGGCCTCATTTCTATGAGGTTTATTCCTCTGCCTTCAGCTCTCACAGACTGAAAATTCCAGATGGGTTTGCCTGTCACATGAAGGGAAAGACATACGGATCAGTTTCTTTAACTGGTCCTAGTGGAAATGTGTGGACAGTTCAATTAATTAGGCAGGACAGTGATCTATTCTTTCATCATGGATGGTCAACATTTGTGGTAGATCATAATCTAGAATGCGGTGAGCTTTTGGTATTCAGATATGAGGGTTGCTTGCATTTTTCCGTCCAAGTATTTGATAAGGATGCATGTGAGAAAGAGGCAGCATTTCATTCCAAATGCAGTCGGAGTTCAAGTGACTTTGATGATATTAAAGGACATAAAAGAGATTCAAAGGAGAATTCTTCTTTGGATATTGACGTGGAAGGTGTTCCAAAGAAAATGAGAGGTTGTGCCAATGAGAACCAGGAACTTGAGCTGGGTACTATTGGTAAAGAACTATCCCAGTATGAGGTAGTAAGACCCATTAGTATGTACAGAGAAAATGAGGAAACCTCGAAAGCATGTTTAGCTAAGGATGTCCCTGTGTCTTTTCACATGGAAAATAGGATGGAGGTTGAAGAGGCTGCCATCCTGTATAGAGGTGGAAAAGAAGATGATCGTTATATTCTAAGCAGCGTTTCATTATCAAATGTATCAGCACATGATGAGAAAAAAGTTGCTCAGTCATTTACTTCCATTTTCCCCTATTTTGTTAAAATCATGAAAGGCTTCAATGTCAGTGGTTCATATACTCTGAATATCCCATATCAGTTTTCAATGGCACATCTTCCTAATTGCAAGATAAAGATTATTCTTCATAATTTGAAAGGAGAACATTGGACTGTTAATTCTGTGCCAACAACTAGAGTGCATACTAGTCACACTCTTTGCGGAGGATGGATGGCTTTTGTTCGGGGTAATAACATAAAGATTGGAGATATCTGTATCTTTGAGCTCGTGCATGAGTGTGAATTACGTGTTCGCATTGCTGGGGTAGGAAAAGATGGGTTAGATTGCCAAGTTGGAAAAGTGGCCATTAATAACCCTAGTGCAGGACATGCTGTAACTTCCAGATGTATGCCAATGAATCCAAAAATCAACTCAAAATGCATAAGCAAAGTTGATCTATCAGATAAAAAATGGTCAAAGATGGGTCAAGAAACTGTTTTATCCGCTGACTTAAAGAAACCTGGTAGAGCTTCAAATACTTCTAAGAAGATGGAGACTTGCTCTCAGTCAAAAGCTGCCCATAAAAAAATGGGTAAGGTTTTTCTGTAA 1464 0.3921 MCDDQNEVNSGKLKKSDAVVLRSGNALHLFESRTKKERNRASFMGCDCGGKLNVRRPHFYEVYSSAFSSHRLKIPDGFACHMKGKTYGSVSLTGPSGNVWTVQLIRQDSDLFFHHGWSTFVVDHNLECGELLVFRYEGCLHFSVQVFDKDACEKEAAFHSKCSRSSSDFDDIKGHKRDSKENSSLDIDVEGVPKKMRGCANENQELELGTIGKELSQYEVVRPISMYRENEETSKACLAKDVPVSFHMENRMEVEEAAILYRGGKEDDRYILSSVSLSNVSAHDEKKVAQSFTSIFPYFVKIMKGFNVSGSYTLNIPYQFSMAHLPNCKIKIILHNLKGEHWTVNSVPTTRVHTSHTLCGGWMAFVRGNNIKIGDICIFELVHECELRVRIAGVGKDGLDCQVGKVAINNPSAGHAVTSRCMPMNPKINSKCISKVDLSDKKWSKMGQETVLSADLKKPGRASNTSKKMETCSQSKAAHKKMGKVFL 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01111 487 MobiDBLite consensus disorder prediction 164 183 - -
Pste8g01111 487 SUPERFAMILY DNA-binding pseudobarrel domain 295 393 IPR015300 -
Pste8g01111 487 CDD B3_DNA 64 148 IPR003340 GO:0003677
Pste8g01111 487 CDD B3_DNA 297 391 IPR003340 GO:0003677
Pste8g01111 487 SUPERFAMILY DNA-binding pseudobarrel domain 53 152 IPR015300 -
Pste8g01111 487 Gene3D - 279 394 IPR015300 -
Pste8g01111 487 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 70 397 IPR044837 -
Pste8g01111 487 Gene3D - 51 152 IPR015300 -
Pste8g01111 487 ProSiteProfiles B3 DNA-binding domain profile. 299 395 IPR003340 GO:0003677
Pste8g01111 487 ProSiteProfiles B3 DNA-binding domain profile. 57 150 IPR003340 GO:0003677
Pste8g01111 487 SMART B3_2 59 150 IPR003340 GO:0003677
Pste8g01111 487 SMART B3_2 299 395 IPR003340 GO:0003677
Pste8g01111 487 Pfam B3 DNA binding domain 299 390 IPR003340 GO:0003677
Pste8g01111 487 Pfam B3 DNA binding domain 64 149 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01111 Pste-Chr8 5783312 5786251 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste8g01111 B3 3.4e-12 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01111 8 5783312 5786251 Pste8g01111 8 5783312 5786251 ECH