Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01092 ATGGAAGCACTTAAACGATCCTCTTCTTTATCTTCTTCCTCTTCCGAGTCCACACCAAGGATAAGCAGTTACAAAATAAAAGGCCCCTGGAGTGCGGAGGAGGATCGGATCCTGACCCAGCTGGTGGAGGCCCATGGGCCTAGAAACTGGGCCTTGATAAGCCGTTTCATAAAGGGGCGGTCTGGGAAGTCGTGCAGGCTTCGGTGGTGTAACCAGCTGAGTCCCGCGGTGGAGCACCGAGCCTTCTCCACGGGCGAGGACGAGGTTATCCTTCACGCGCACGCCCTATTCGGGAACAAGTGGGCCACCATTGCCAGAATGCTGCCCGGCAGAACCGACATGGCTGTTAAGAACCACTGGAACGCCACGCTCAAGCGGAAGGCCTCCTCCCAACGTCGTCGTTTTGATGGGGATGACCCGTTGACCGCATTAACCCTAGCGCCGCCAGGGAGTGAGAGCATGCCTGTTTCACCGCCGGGGCTTTGGGATGCCATCGTCGTGGGGGAAGGGGAAATCAGAGAATATATGTCTTCCTCTTTTTCTCACAACTTCCGCTCCAATCAGGATTAA 570 0.5596 MEALKRSSSLSSSSSESTPRISSYKIKGPWSAEEDRILTQLVEAHGPRNWALISRFIKGRSGKSCRLRWCNQLSPAVEHRAFSTGEDEVILHAHALFGNKWATIARMLPGRTDMAVKNHWNATLKRKASSQRRRFDGDDPLTALTLAPPGSESMPVSPPGLWDAIVVGEGEIREYMSSSFSHNFRSNQD 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01092 189 Gene3D - 80 138 - -
Pste8g01092 189 CDD SANT 81 124 IPR001005 -
Pste8g01092 189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 77 IPR017930 -
Pste8g01092 189 FunFam MYB transcription factor 27 78 - -
Pste8g01092 189 ProSiteProfiles Myb-like domain profile. 22 73 IPR001005 -
Pste8g01092 189 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Pste8g01092 189 SUPERFAMILY Homeodomain-like 25 120 IPR009057 -
Pste8g01092 189 Gene3D - 26 78 - -
Pste8g01092 189 CDD SANT 29 71 IPR001005 -
Pste8g01092 189 MobiDBLite consensus disorder prediction 1 23 - -
Pste8g01092 189 SMART sant 78 126 IPR001005 -
Pste8g01092 189 SMART sant 26 75 IPR001005 -
Pste8g01092 189 PANTHER MYB PROTEIN-RELATED 27 134 - -
Pste8g01092 189 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 128 IPR017930 -
Pste8g01092 189 Pfam Myb-like DNA-binding domain 27 73 IPR001005 -
Pste8g01092 189 Pfam Myb-like DNA-binding domain 81 121 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01092 Pste-Chr8 5688304 5688873 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste8g01092 Myb_DNA-binding 1.6e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01092 8 5688304 5688873 Pste8g01092 8 5688304 5688873 ECH