Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01078 AGGGCTCAAAAACGTTCATATGGAGAAGCTTCTTCAAAGGTTACAAATGGTGGTGTTGAACATTTTTCCAAGGTTTATGTTGTTGAGGAACAACCGGGGTTGATGGAAAATGACAAAGTGAAGAGTTTGCCGGGAGAACCAGAAGGAGTGGATTTTGATCAATATGGTGGCTATGTAACTGTGGATGCTAAAGCAGGAAGAAAACTATTCTACTACTTTGTGGAGTCACCTAGTCACCTCACAATGCTTCCAACAAGCCTCTTGTTCTATGGGCCTGGCTGCTCTTCCCTAGGGTATGGAGCCTTGCAAGAACTGGGACCTTTTAGAGTCAACAGTGATGGAAGAACACTTCACAGAAATGAGTATGCATGGAACAATGCCCGAGTTGGTTTTTCATATTCAAACACTTTCGCTGACTATTCTAAAACTGGTGACAAGAGCACAGCCATGGACTCTTACACTTTTCTTCTAAACTGGCTCCAGAGATTTCCACACTACAAAACTCGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTCGCACTATTCTCTCTTATAATAAGCTTAAAAATCACACAGTCATCAACCTAAAAGGGATTGCGATTGGGAATGGGTGGATAGATGATAATATGTGTGCAAAGGGGATGTATGACTATTTCTGGACACATGCTCAGAACTCTGATGAAACCCATGAAGGAATTCAAAGACATTGTGACTTTGAGAGCGGTAACTTGACCAGTGAATGCAACAAATATCAAAATAAAGGGGATATTGAGATTGGAAGCATTGATATATATAACATATATGCTCCTCCTTGCGATTCAGCTGCATCAAAAGCTAGTGCCAGTGCTGCTGCTAACTCTGACAGCAATTTCGACCCTTGTTCAGACTATTATACCAATTCCTACTTAAATCTCGCTGAAGTTCAAGAGGCCCTCCATGCAAAAGCCCAGAATGGTCTCCTTGCAGGGGTGGGATGGGAAGATAGCCCAGGAACAATGCTACCCACTATAAATCGGTTAATATCAAGTGGCATAAACACATGGATATATAGTGGCGATACAGATGGGCGTGTTCCCATAACATCGTCTAGGTATGCAGTAAATGCCTTGAAACTTCCAGTGGAGACAGCATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATACTTAGTTGGGTACAAAGGGCTCACACTCATCACTGTAAGAGGAGCAGGGCACATGGTTCCAAGTTACCAATCCCAGAGAGCGCTAGTCATGATCTCATTTTTCCTTCGTGGAGAACTTCCTCCTCAACTAACCTCT 1329 0.4327 RAQKRSYGEASSKVTNGGVEHFSKVYVVEEQPGLMENDKVKSLPGEPEGVDFDQYGGYVTVDAKAGRKLFYYFVESPSHLTMLPTSLLFYGPGCSSLGYGALQELGPFRVNSDGRTLHRNEYAWNNARVGFSYSNTFADYSKTGDKSTAMDSYTFLLNWLQRFPHYKTRDLFITGESYAGHYVPQLARTILSYNKLKNHTVINLKGIAIGNGWIDDNMCAKGMYDYFWTHAQNSDETHEGIQRHCDFESGNLTSECNKYQNKGDIEIGSIDIYNIYAPPCDSAASKASASAAANSDSNFDPCSDYYTNSYLNLAEVQEALHAKAQNGLLAGVGWEDSPGTMLPTINRLISSGINTWIYSGDTDGRVPITSSRYAVNALKLPVETAWRPWYSGNEVGGYLVGYKGLTLITVRGAGHMVPSYQSQRALVMISFFLRGELPPQLTS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01078 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Pste8g01078 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Pste8g01078 443 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 133 IPR001563 GO:0004185|GO:0006508
Pste8g01078 443 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 421 IPR001563 GO:0004185|GO:0006508
Pste8g01078 443 FunFam Carboxypeptidase 341 435 - -
Pste8g01078 443 FunFam Carboxypeptidase 34 282 - -
Pste8g01078 443 SUPERFAMILY alpha/beta-Hydrolases 37 436 IPR029058 -
Pste8g01078 443 Gene3D - 341 435 - -
Pste8g01078 443 ProSitePatterns Serine carboxypeptidases, histidine active site. 405 422 IPR033124 GO:0004185
Pste8g01078 443 Gene3D - 302 335 - -
Pste8g01078 443 Pfam Serine carboxypeptidase 44 434 IPR001563 GO:0004185|GO:0006508
Pste8g01078 443 Gene3D alpha/beta hydrolase 34 282 IPR029058 -
Pste8g01078 443 ProSitePatterns Serine carboxypeptidases, serine active site. 173 180 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01078 Pste-Chr8 5623535 5629683 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01078 8 5623535 5629683 Pste8g01078 8 5623535 5629683 ECH