Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01047 ATCTTTCCTTAGCAATAATTAATTCCTTGTTGCATATAGTGCTTTCTGCCCACAAGTAAGACCCTTGCTTTCAGCATTAACGTTACTCAAAGAAAGAATATTTTGTGCACACACAAACCCCAAAAATTCGCTTTAATTTCCCATATCCATGGAGAGAGCTAAGTCATCGATTGAACACATTCAGCCTCCAACTTATGGAAACTTGGTAACCATTCTTAGCATCGATGGGGGTGGTATTAGGGGCATCATTCCCGCTACCATTATTGCTTTCCTTGAATCTCAGCTTCAGGAGTTGGATGGTCCAGATGCAAGGCTTGCAGACTACTTTGATGTGATATCAGGAACAAGCACAGGAGGTCTTGTAACTGCTATGATAACTGCTCCAGACAACAATAATCGACCACTTTTTACTGCCAAAGATATCAAGCCTTTTTACTTGGAACACTGCCCTAAAATTTTCCCACAGAATAGTGGCCTCGGTGGGACGATGTTAGCAAAGGTAGTAAGATCTCTGGGAGGACCCAAATATGAGGGGAAATACCTTCATGGATTAGTGAGAGAGAAACTTGGAGACATTCTCTTGCATCAGACCCTCACTAATGTTGTCATTCCCACCTTCGACATCAAGTCTTTGCAACCCACTATTTTCTCATCTTATCAGATTAAGATGTCCCCTTGCATGGATGCTAAACTCTCCGACATATGCATAAGCACGTCCGCTGCTCCTACTTATCTTCCAGCTCACAATTTCAAGAACCAAGATTCGAAAGGGAACATACATGAATTCAACCTCATTGATGGTGGCGTTTGTGCGAATAATCCGACCTTAGTTGCGATGAACGAAGTAACAAAGCAAATCATTAAGCAAAATTCTGATTTCTTTCCGATGAAGCCTCTGGAATATAGTCGCTTCCTAATAATTTCGATAGGCACCGGCACAACAAAAAATGAGGAAAAATTCAATGCACAAATGGCAGCCAAATGGGGTTTATTGGATTGGCTAACCCATAGTGGTACTACTCCCTTAATAGATGTTTTCACTCAATCCAGTGCTGATATGGTGGATTTCCATTTATCCGCTGTGACTCAAGCGCATCATTCAGAAGATAATTACCTTCGAATACAGGATGATACATTGACTGGAACAGAATCTTCAGTTGACATTGCTACAAAGGAGAACTTGGAGAAACTTTGCGAAATTGGAGAAAATCTGTTAAAGAAACCAGTCTCTAGGGTCAATTTAGAGAATGGCCTCTTCGAGCCACTGAAAAATGGAGAAACCAATCAAGATGCTCTCAAAAGGTTTGCAAAAATACTTTCACAAGAGAGGAGACTCCGTGAAATGAGATCCCCGCACACAAAAAAAATCTTCTAGTTCCATTTGTATATATTCCTATGTTTTATGCTGGCTAGGCCTTCGATTCTATCAGCTTATGTGATTTAATTACTTTTTGTTATTGTTTTTGTAACATATAATAGAACCTGTTTTAGAATGAGGTCAAAAATAGAATTAATTTCTTATTGGAAAAAAAATGTAACACCAGGGGCTAGTACTTGTTATAACTTTATTTTTACTTTGCTTTTGCGTATCGAGATTCTAAATCGACG 1608 0.3937 MERAKSSIEHIQPPTYGNLVTILSIDGGGIRGIIPATIIAFLESQLQELDGPDARLADYFDVISGTSTGGLVTAMITAPDNNNRPLFTAKDIKPFYLEHCPKIFPQNSGLGGTMLAKVVRSLGGPKYEGKYLHGLVREKLGDILLHQTLTNVVIPTFDIKSLQPTIFSSYQIKMSPCMDAKLSDICISTSAAPTYLPAHNFKNQDSKGNIHEFNLIDGGVCANNPTLVAMNEVTKQIIKQNSDFFPMKPLEYSRFLIISIGTGTTKNEEKFNAQMAAKWGLLDWLTHSGTTPLIDVFTQSSADMVDFHLSAVTQAHHSEDNYLRIQDDTLTGTESSVDIATKENLEKLCEIGENLLKKPVSRVNLENGLFEPLKNGETNQDALKRFAKILSQERRLREMRSPHTKKIF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01047 408 FunFam Patatin 12 402 - -
Pste8g01047 408 SUPERFAMILY FabD/lysophospholipase-like 18 369 IPR016035 -
Pste8g01047 408 PANTHER XYLOSE ISOMERASE 5 398 - -
Pste8g01047 408 Pfam Patatin-like phospholipase 23 230 IPR002641 GO:0006629
Pste8g01047 408 CDD Pat17_isozyme_like 17 368 - -
Pste8g01047 408 Gene3D Cytosolic phospholipase A2 catalytic domain 9 402 - -
Pste8g01047 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 230 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01047 Pste-Chr8 5516711 5519865 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01047 11 405 Miscellaneous Gene Families AT2G26560 66.076 0.0 536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01047 8 5516711 5519865 Pste8g01047 8 5516711 5519865 ECH
Pste8g01047 8 5516711 5519865 Pste2g00986 2 10483613 10490810 PCT