Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01042 TGTATTCTTGTAACATTATCCTTACTCAAACGAGAGAATATTTGTGCCGACACAAATAACCTCGAGTTCGCCTTAATTAATTGCCAATATATATCCATGGAGAGAGCAAAGTCATTGATTCATCCTCCAACTTACGGAAACTTAGTAACCATTCTTAGCATCGATGGGGGTGGTATTAGGGGCATTATCCCCGCTACCATTATTGAATTCCTTGAATCTCAGCTTCAGGAATTGGATGGCCCAGATGCAAGGCTTGCAGACTATTTTGATGTTATATCAGGAACAAGCACTGGAGGCCTTGTAGCAGCTATGTTAACTGCTCCAGACAGCAATAATCGACCACTTTTTGCTGCCAAAGATATCAAACCTTTTTACATGGAACACAGTCCTCAAATTTTCCCACAGCGTAGAGGCCTCTGTGGGACGTTATTAGCAAAGGTAATGAGAGCTATGCTAGGACCAATATACGACGGGAAATACCTGCATAACGTCATAAGAAAGAAACTTGGAGAAATTCGGTTGCATGAGACACTCACCAACGTTGTCATTCCCACCTTCGACATCAAGTCTTTGCGTTCCATTGTTTTCTCATCTTATCAGATTAAGACGTCCCCTTTCCTGGATGCTAAGCTCTCGGATATATGCATCAGCACGTCCGCTGCTCCTACTTTTCTTCCTGCTCACAATTTCAATAACAAAGATTCAAAAGGGAAAGTACACGAATTCAACCTCATTGATGGTGGCGTTTGTGCAAATAATCCAACCTTGGTTGCCTTGAACGAAGTAACAAGGCAGATCATTAAGCAAAATACTGATTTCTTGCCAATGAAGCCTCTGGAGTATAATCGCTTCCTAATAATTTCAATTGGCACCGGCACAGCGAAAAGTGAGGGAAAATTCGATGCACATATGACAGCCAAATGGGGGTTATTAGATTGGCTAACACAAAGTGGTTGCAATCCTTTCATTGAAATTTTCACTCTAGCCAGTGCAGATATGGTGGATTCGCATGTATCTGCTGTAACTCAAGCACTTGATTCAGAAGATAATTACCTCCGAATAGAGGATGACACATTAACTGGAACGAATTCTTCGGTTGACATTGCTACCAAGGAAAACTTGGAGAAGCTTTGCCATATCGGAGAGAAGCTGCTGAAGAAACCAGTATCTAGGCTCAATTTAGAGAATGGGGTGTTTGAGCCACTGAAAAATAGGGGAACCAATGAAGATGCTCTCAAAAGGTATGCAAAACTACTTGTACAAGAGAAGAGAGTGCGTCAAACAAGATCCCAACACGCTAATTGAGTCCCATTTATATATTGTAGGCGTGTTCGATTCCAACAGCTTCAGTGATTTAATTACTGATCGTGTTAATTTGTTGCTCACAAACTGTAAAACATTTGGATATAGAACGTGTTTTTGTAGAGGTCAAAAATTACTCTTTAGGAAATGTTTCAGTAGTTGGTTTGTTTTATTTTTTACTTAGCTTTTGTGTATCAATTATTAACTGC 1511 0.403 CILVTLSLLKRENICADTNNLEFALINCQYISMERAKSLIHPPTYGNLVTILSIDGGGIRGIIPATIIEFLESQLQELDGPDARLADYFDVISGTSTGGLVAAMLTAPDSNNRPLFAAKDIKPFYMEHSPQIFPQRRGLCGTLLAKVMRAMLGPIYDGKYLHNVIRKKLGEIRLHETLTNVVIPTFDIKSLRSIVFSSYQIKTSPFLDAKLSDICISTSAAPTFLPAHNFNNKDSKGKVHEFNLIDGGVCANNPTLVALNEVTRQIIKQNTDFLPMKPLEYNRFLIISIGTGTAKSEGKFDAHMTAKWGLLDWLTQSGCNPFIEIFTLASADMVDSHVSAVTQALDSEDNYLRIEDDTLTGTNSSVDIATKENLEKLCHIGEKLLKKPVSRLNLENGVFEPLKNRGTNEDALKRYAKLLVQEKRVRQTRSQHAN 434
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01042 434 Pfam Patatin-like phospholipase 52 259 IPR002641 GO:0006629
Pste8g01042 434 PANTHER XYLOSE ISOMERASE 32 428 - -
Pste8g01042 434 SUPERFAMILY FabD/lysophospholipase-like 47 398 IPR016035 -
Pste8g01042 434 CDD Pat17_isozyme_like 46 397 - -
Pste8g01042 434 Gene3D Cytosolic phospholipase A2 catalytic domain 41 432 - -
Pste8g01042 434 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 52 259 IPR002641 GO:0006629
Pste8g01042 434 FunFam Patatin 41 431 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste8g01042 Pste-Chr8 5475320 5483721 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01042 31 433 Miscellaneous Gene Families AT2G26560 58.809 2.81e-170 482
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01042 8 5475320 5483721 Pste8g01042 8 5475320 5483721 ECH