Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01040 GCCTTTACTCTTTAGCACTTACTGGCATTAACATACAGCATAGTTTGGAGGAGAAAGCAAGCAATCTTTGTTTTCGTGAAACAAAAGAAAAATAAGATTAGGTTGTCGGTTCCGTTATGTCCGGCATGGAGAGGCTTCAGAGGATGTTCGCGGGTGCAGGAGGAGCGCTGGGCCATCCCCCACCGGATTCCCCCACCCTCGATTCCTCCGAGCAGGTTTACATCTCCTCCCTCGCCCTTCTAAAAATGCTCAAACACGGAAGAGCTGGGGTACCCATGGAAGTGATGGGTTTGATGTTGGGGGAGTTCGTGGACGAGTACACTGTTCGCGTGGTGGATGTGTTTGCGATGCCGCAGAGTGGGACCGGTGTCAGCGTTGAAGCTGTTGATCATGTTTTTCAGACCAATATGCTTGATATGTTGAAGCAGACTGGCCGGCCGGAGATGGTTGTAGGGTGGTATCACTCCCATCCTGGATTTGGGTGTTGGCTTTCTGGAGTGGACATTAATACACAACAGAGTTTTGAGGCTCTAAATCAACGGGCAGTGGCTGTTGTGGTGGATCCCATTCAGAGTGTTAAAGGCAAGGTGGTAATTGATGCTTTCCGGCTGATTAATCCACAAACTATGATGCTGGGCCAGGAACCACGACAGACAACTTCCAACCTCGGCCATCTAAACAAACCATCTATTCAAGCTCTGATCCATGGCTTGAATAGACATTATTACTCCATAGCAATTAATTACAGAAAGAATGAACTTGAAGAGAAGATGTTGCTTAACCTTCACAAGAAGAAATGGACTGATGGTTTGACACTCAGGCGTTTTGATTCACATTCTAAAACTAATGAGCAGACTGTTCAGGTAGGGGTTGCAGCTGTACTTTCATATGCAAATATTATGGTGCATGTATGGATTTTGCATGAAGAAGGCAATGCCTGGCCTACTTATGGCGAGGAGATGTTGAATTTAGCATCCAAGTACAACAAAGCTGTGCAGGAAGAAGATGAGCTGCCACCAGAAAAACTTGCAATTGCAAATGTAGGAAGGCAAGATGCTAAGAAACACCTTGAAGAGCATGTTTCCAATTTGATGTCGTCAAACATTGTTCAGACTCTGGGAATGATGCTCGACACCGTTGTTTTTTAGAGTTAGCATCGTCCAATGTATTCTTCCTATGGTTACTGATTAAAAAGAAAGAAACCTCCCTACGGTTAGCAACATTTCGTTAATATTCTTGACACGCATGTGTTCACAGAAATTGTTTTGTCTCTAGTATTTGCATTTTGGTGTGTTCTTTAAAAATGCAGGAACAAAGGTACATGTTTGAATATGAGAATCATTGTTTAATCGCTCTAAATGTAACGGAGATCTTCATGGTTGTGCACTAGAGATTTATTTATCTCTCGCTTCCGTTGTAAGTGGAAACACGGAGCCATTAAAACTGCATGTGAACTTCAGTGTAATTTACCAGTTTAGTGCTTGAAATTATAAAGATTGGTCA 1503 0.4331 MSGMERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDSHSKTNEQTVQVGVAAVLSYANIMVHVWILHEEGNAWPTYGEEMLNLASKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTLGMMLDTVVF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01040 343 Gene3D Cytidine Deaminase, domain 2 20 237 - -
Pste8g01040 343 SMART pad1_6 33 168 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste8g01040 343 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 29 340 - -
Pste8g01040 343 SUPERFAMILY JAB1/MPN domain 34 171 - -
Pste8g01040 343 CDD MPN_RPN11_CSN5 23 320 - -
Pste8g01040 343 Pfam Maintenance of mitochondrial structure and function 176 330 IPR024969 -
Pste8g01040 343 ProSiteProfiles MPN domain profile. 34 169 IPR037518 -
Pste8g01040 343 FunFam 26S proteasome non-ATPase regulatory subunit 23 237 - -
Pste8g01040 343 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 30 141 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01040 Pste-Chr8 5467884 5473362 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01040 8 5467884 5473362 Pste8g01040 8 5467884 5473362 ECH