Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01027 CTTTTATTCTCCATTCTCTTTTCTCTCTATCAACGAAAACAACAATGGAATATTTGCAGGACGCTAGGATCCGCGTTTCTCGATCAAACAGAACAATCCAATTCAGCTTGTCTCCACATTTTTGCGTGTGAACCTCATCGCCATTTTTCTCTTCTTTACTGATTGGATTTAATTGCACAGAATGGAGGTTTAAAGCTGGATACCACGTGTTGCTGTTGCTATTACATGCGGTGGTGGTGATTGTGTTATTTGGAATTTGAGGATTGAGTGGGGGCGTGAAAAATGGCTGCCAAGAGTGAACACCAGACGGTTCCTCTTTCGGTGCTCCTGAAGCGTGAATTAGCGCACGAGAAAATTGAGAAACCTGAGATTGCTCATGGTCAAGCGTGCCAGAGCAAGAAAGGGGAGGATTTGACGCTACTCAAGACAGAATGCCAGAGGGTGGTGGGTGATGGGGTTTCTACTTATTCAGTTTTTGGGCTATTTGATGGACATAATGGGTCTGCTGCTGCTATTTATGCTAAGGAGAATCTTCTAAATAATGTCTTAAGTGCAATTCCTCCAGACCTTAACAGAGATGAATGGATAGCAGCACTGCCTAGGGCTTTGGTTGCTGGATTTGTAAAAACCGATAAAGATTTTCAAGAGAAAGCACAAAAATCAGGAACAACCGTCACCTTTGTGATTATAGAAGGATGGGTTGTCACAGTTGCATCAGTTGGTGATTCCCGTTGTGTACTTGAATCTTCTGATGGTGAGATTTATTACTTGTCCGCAGATCACAGGCTAGAAACGAATGAAGAAGAGAGGGTACGGATCACCTCAAGCGGTGGTGAAGTTGGTCGATTAAATACAGGGGGGGGTGCAGAGCTGTCCACTGCTGGAGGCCGGCTTGTTATCTGTAGTGATGGTGTTTGGGATTCTCTACCTGCAGAAGTAGCACTTGATCATTGCCGTGGAATGCCAGCCGATGCTGCTGCACAACATATTGTTAAAGAAGCTGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATCGTTGTTGATATATTACATCAGGAGAAGCCACCTGTTTCTGCGCCACAAACAAAGAAGCCAGTAAAGGGAATGCTCAAGTCCATGTTTCGTAAAAAGTCGTCTGAATCATCTTCTATTGACAAAGAGTACATGGAGCCAGATGTAGTAGAGGAAATATATGAGGAAGGATCTGCAATGCTTTCAGAGAGGTTCGATACTAAATATCCAGTCTGCAACATGTTCAAGTTGTTTATGTGTGCAGTATGTCAAGTAGAGATAAAACCTGGAGAGGGCATTTCAATACACGAGGGTGCGCCCAATGCTCAAAAATTTCGTCCCTGGGACGGACCTTTCCTGTGCTCAAGTTGCCAGGAGAAGAAAGAAGCCATGGAAGGGAAAAAATTATCAGGTAGAGTTAGCAGTGGAAGTGACGATTGAAGTCTCGTGTATATTTTCATTTTGTTAGTGATAAAATTTGTTCATATGATGGTAAGGTCATACATTTAAGCAACGAAGACTCCCCTCTATAATTGAAGGGGTTTTATGGATATAATATATATGAAACCAATAGCAACCTATTAGAAGATTTCTAACTTGGAAGTATGAAATAGCAACAACCAAGAATTGTGAAGGGTTGTATTAAATGTGTCCGTCCATAACAAGATGTTCAAGGTAATGCATTCTTTTTTACATATTTTTTTTTTCTGGGGCCCGTTCTAATTTGTATACGGGTCTTTTGGAATCAC 1766 0.4196 MAAKSEHQTVPLSVLLKRELAHEKIEKPEIAHGQACQSKKGEDLTLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPPDLNRDEWIAALPRALVAGFVKTDKDFQEKAQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSDGEIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAELSTAGGRLVICSDGVWDSLPAEVALDHCRGMPADAAAQHIVKEAVQAKGLRDDTTCIVVDILHQEKPPVSAPQTKKPVKGMLKSMFRKKSSESSSIDKEYMEPDVVEEIYEEGSAMLSERFDTKYPVCNMFKLFMCAVCQVEIKPGEGISIHEGAPNAQKFRPWDGPFLCSSCQEKKEAMEGKKLSGRVSSGSDD 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01027 391 Gene3D - 30 264 IPR036457 -
Pste8g01027 391 CDD PP2Cc 62 257 IPR001932 -
Pste8g01027 391 ProSiteProfiles PPM-type phosphatase domain profile. 24 257 IPR001932 -
Pste8g01027 391 SMART PP2C_4 26 255 IPR001932 -
Pste8g01027 391 PANTHER PROTEIN PHOSPHATASE 32 256 IPR015655 GO:0004722|GO:0006470
Pste8g01027 391 SMART PP2C_SIG_2 46 257 IPR001932 -
Pste8g01027 391 SUPERFAMILY PP2C-like 38 257 IPR036457 -
Pste8g01027 391 Pfam Protein phosphatase 2C 57 188 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01027 Pste-Chr8 5410961 5420858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01027 1 390 PP2C-type Phosphatase Gene Family AT1G47380 70.561 0.0 612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01027 8 5410961 5420858 Pste8g01027 8 5410961 5420858 ECH
Pste8g01027 8 5410961 5420858 Pste2g01002 2 10666772 10671354 PCT