Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01016 ATGCCTCTGAGACTCCCTTTTAGCGCACCAAAGAAAAACTCTCACCCAGATCGTATGCGCAGGCCTAATGACAAACACAAGAGTTATGACGCAGTTGCAGTGTTGAAAATAATGAAAACACTGAGAGAAGCAGATAAAGACAAGGATGGTTGTTATGACAAGGAAGAGCTGAAGAGTGCTTTGGATCAGTTAGGTGCCTACTTTCCCGGATGGAGAGCCAACCGTTGTCTCCTCAATGCCGACGCCGACAACGACGGCGTCATTAGCGGCGATGAAATTCAGGCCCTCCTCGAGTATCTTGCTTCCCGCGGCTACGGAAACAAACATCATTATTACCATTCACTGGATGATATCCTCACATGCACATCAGTGATTAATTTGAGAATGGTTGCAGTTGTGAACATTCAACTCAACTCATTTTTTCTGGCTGCTGATGAAAAGAAGAGTCCTGTGGTGGATATGAGGGAAGTGGAGAAAATAAAGAAATTGTTAAGAAAAGCAGATAAAGATAAGAACGGTTGTTATAACAGGGATGAGCTGAAGAACGCTCTGAAGGATTTAGGTGCCTACTTCCCTGCATGGAGAACCAACCGTTGTTTCGCTAACGTTGACTCCGACAACGATGGCCAAATTAGTGGCCATGAAATTGATCATCTCATCGACTATCTTCTCTCTTGTGGCTATGGCAAATAG 693 0.4444 MPLRLPFSAPKKNSHPDRMRRPNDKHKSYDAVAVLKIMKTLREADKDKDGCYDKEELKSALDQLGAYFPGWRANRCLLNADADNDGVISGDEIQALLEYLASRGYGNKHHYYHSLDDILTCTSVINLRMVAVVNIQLNSFFLAADEKKSPVVDMREVEKIKKLLRKADKDKNGCYNRDELKNALKDLGAYFPAWRTNRCFANVDSDNDGQISGHEIDHLIDYLLSCGYGK 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01016 230 CDD EFh 159 220 IPR002048 GO:0005509
Pste8g01016 230 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Pste8g01016 230 Gene3D - 126 225 - -
Pste8g01016 230 SMART efh_1 159 187 IPR002048 GO:0005509
Pste8g01016 230 SMART efh_1 36 64 IPR002048 GO:0005509
Pste8g01016 230 SMART efh_1 72 100 IPR002048 GO:0005509
Pste8g01016 230 SMART efh_1 195 223 IPR002048 GO:0005509
Pste8g01016 230 MobiDBLite consensus disorder prediction 11 26 - -
Pste8g01016 230 PANTHER CALCIUM BINDING PROTEIN 145 216 - -
Pste8g01016 230 ProSiteProfiles EF-hand calcium-binding domain profile. 32 67 IPR002048 GO:0005509
Pste8g01016 230 ProSitePatterns EF-hand calcium-binding domain. 204 216 IPR018247 -
Pste8g01016 230 MobiDBLite consensus disorder prediction 1 26 - -
Pste8g01016 230 CDD EFh 36 97 IPR002048 GO:0005509
Pste8g01016 230 Pfam EF hand 198 215 IPR002048 GO:0005509
Pste8g01016 230 Pfam EF hand 80 96 IPR002048 GO:0005509
Pste8g01016 230 Gene3D - 11 111 - -
Pste8g01016 230 ProSiteProfiles EF-hand calcium-binding domain profile. 155 190 IPR002048 GO:0005509
Pste8g01016 230 ProSiteProfiles EF-hand calcium-binding domain profile. 81 103 IPR002048 GO:0005509
Pste8g01016 230 SUPERFAMILY EF-hand 36 215 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01016 Pste-Chr8 5338148 5345087 Proximal