Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g01007 ATGGATGTTTCGACACTTCAAAAGTTGGTGAAGACAGCACCATCTAAAGCAGTTGTCATCAGAATCAATTTGCTCTGCCTTGCCATCTTTCTGGTAGTTTATGCAGCCCTTCTTCTCCGTCCATCCTCTTCGGTATATTTCGAGAATGCAGCCTCACTTGTCAGGTGCTCCTTGCGCGAGTGCCATCACAAGGGAGAAAAAAGCATAAAGATGAAAACTGTATTGGAGGAAGCACAACTGAAATCAAGAAGGCCGAAGCAGAACGCGACTAAGATAGAGGTGCCAAGTTTTTTTGGCGAAATGGGGAAAGGAATGAAGATGGGAATGGTGAACATGCATGAAGATGATGTGAGTGAATGGAACAAGCTTGGAGTAACAAGCCACGTTTATTTTGAGAGGGTATCACAGTATTTCAATTGGACAGATTTATATCCAGAATGGATAGACGAGGAGGAAGAGAGTGATGTCCCTTCATGCCCTGAGATACCAATGCCAGAGTTTGCAGCCTATGAAGGCATGGACATGATCATTGCCAAGTTGCCATGCAAGTACCCCGAAGAAGGGTGGGGAAGGAACGTTTTCAGGTTACAAGTTCATCTTATTGTGGCAAATTTGGCAGTGAAGAAGGGGAAGAGGGATTGGAATTGGAAGGCAAAAGTGGTTTTGTGGAGTAAGTGTAGGCCAATGCTGGAGCTGTTTCGGTGCAACGATTTGGTAAAGCAAGAGAATGACTGGTGGTATTATGAGGTTGATGTAAAGAGGTTGGAGCAAAAGGTTTCTCTGCCTATTGGGTCCTGCAATTTGGCTCTGCCTCTATGGGAACAAGTTTCTAACTCTGAATCTGATTATTCTGATTGTTCTATTGGCTGGTTGGATCCTTATGAAACTAGGTTTTCAAGTGATGACGATGAGCCTCTTGAAACAAATAACAATTTTGTTGTGCTTGTTCTCTATTATAGATGCAATTATAGTGCGATGGAAGAAAAGCTTACTGAAAGCAACTTATTAAGAATCGACAAGGTGTACGATACGTCAAACCTGGAAGAAAGCGTTGGAAAGGAAGGTCGAGCGAAACGCGAGGCCTATGCGACAGTGCTCCACTCGTCAGAAGGGTACGTCTGCGGCGCAATAACACTGGCACAAACCCTCCTCCAAACCGGAACCAAACGCGACCTTGTCCTCCTCCTCGACAGTTCCATCTCCGCCGAGAAACGCAGCGCTCTTGAACTCTCCGGCTGGAAGACCCGACTCATCACCCGGATCCGAAACCCTCGAGCCGAAAACGGTACTTACAACGAGTACAACTACAGCAAGTTCCGTTTGTGGCAGCTAACGGACTACGACAAAGTCATATTCATCGACGCCGACATCATTGTACTCCGCAACCTCGACATTCTCTTCAACTTCCCACAGATGTCGGCCACCGGTAATGATCAATCAATCTTTAATTCTGGCATCATGCTCATCGAACCCTCCAACTGCACCTTCCATGTTCTCATGTCTCGCCGCTACGACGTCATCTCCTACAACGGTGGCGACCAGGGGTTCCTGAACGAGATATTCGTGTGGTGGCACAGGCTTCCGCGGCGCGTGAACTTCCTGAAGAATTTCTGGGCCAACACGACGCTGGAGGCGAGTGTGAAGAACGCGCTTTTTGGCGCGGATCCTCCGAAGCTGTACGCGATTCACTACCTTGGTCTGAAGCCATGGCATTGCTACAGAGACTACGACTGCAACTGGGACGTGGAGGATCAGAGGGTGTACGCCAGCGACGTGGCGCATCGACGGTGGTGGAAGGTGCACGATGCCATGGATGAGAGGTTGCATAAGTTCTGTAGATTAACGCGCAAGCGAAGAACGGAGTTGAATTGGGAAAGGAGAAAAGCTGGTAAGTTGGGGTTACCAGATATGCATTGGAAGATCAACGTAACCGATCCTAGAAGATCTGGTTCTCTTTTGATTCATTAGTTTTTAGTCTTGTACAATTATACCACATTCTTTTTTTCTTTTTCCTTTTCCTTTTCCATTTTTTTTTCTCCTCTTACTTCATGATTTTACTTACAGAGACGCTTTTTCATGCAGTTTATTTATTTGTGTGCATAGGATAGAGCATTATATAGATGGTTAGCCAATAGTCAATAACAGGAATAATATAAAGAAATTCATGACATTTTTTAGTCGATC 2184 0.4574 MDVSTLQKLVKTAPSKAVVIRINLLCLAIFLVVYAALLLRPSSSVYFENAASLVRCSLRECHHKGEKSIKMKTVLEEAQLKSRRPKQNATKIEVPSFFGEMGKGMKMGMVNMHEDDVSEWNKLGVTSHVYFERVSQYFNWTDLYPEWIDEEEESDVPSCPEIPMPEFAAYEGMDMIIAKLPCKYPEEGWGRNVFRLQVHLIVANLAVKKGKRDWNWKAKVVLWSKCRPMLELFRCNDLVKQENDWWYYEVDVKRLEQKVSLPIGSCNLALPLWEQVSNSESDYSDCSIGWLDPYETRFSSDDDEPLETNNNFVVLVLYYRCNYSAMEEKLTESNLLRIDKVYDTSNLEESVGKEGRAKREAYATVLHSSEGYVCGAITLAQTLLQTGTKRDLVLLLDSSISAEKRSALELSGWKTRLITRIRNPRAENGTYNEYNYSKFRLWQLTDYDKVIFIDADIIVLRNLDILFNFPQMSATGNDQSIFNSGIMLIEPSNCTFHVLMSRRYDVISYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNALFGADPPKLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDAMDERLHKFCRLTRKRRTELNWERRKAGKLGLPDMHWKINVTDPRRSGSLLIH 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g01007 655 PANTHER GLYCOGENIN SUBFAMILY MEMBER 191 649 - -
Pste8g01007 655 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 358 607 IPR029044 -
Pste8g01007 655 FunFam Hexosyltransferase 357 608 - -
Pste8g01007 655 SUPERFAMILY Nucleotide-diphospho-sugar transferases 360 609 IPR029044 -
Pste8g01007 655 CDD GT8_Glycogenin 360 604 - -
Pste8g01007 655 Pfam Glycosyl transferase family 8 370 571 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g01007 Pste-Chr8 5283795 5292440 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g01007 71 654 Glycosyltransferase AT4G33330 49.580 0.0 546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g01007 8 5283795 5292440 Pste8g01007 8 5283795 5292440 ECH