Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00976 CTAACAATAGCAATGGCTCTTCTACTTGACAACTGCGAAAGCATTTTGCTCTCTTTGGACACACACAAATCTGTTCCTGCACCTTTCCTCACCAAAACATACCAACTCGTAGACGACCCCTCCACCGACCACATAGTCTCTTGGGGTGAAGACGACACCACCTTCGTCGTTTGGAGACCACCCGAGTTTGCTAGAGACCTTCTCCCCAACTATTTCAAACACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTATGGTTTTAGGAAGATTGTGCCTGATAGATGGGAGTTCGCGAATGAGTTGTTTAAGAAAGGAGAGAAGCACTTGTTGTGCGAGATCCATAGAAGGAAAACCCCTCAGCAGCATCAACAAGTACAAGCCATGAACCATCACCACCACCAATTTGGACTAAACGTTCCCCCATTCTTTCCATTCCACAACAGACTCAGCGTGTCCCCTACCCATGACTCGGACGAGGTAGTACCCAGTTGGTGTGACTCACCCCCAAGAGGGGTTAGAGATGGAACCAACAACAACAGCAGCAGCAGCTACAACACTGTGACTGCACTCTCTGAAGACAACGAAAGGCTAAGGAGAAGCAACAACATGCTCATGTCGGAGCTCGCACACATGAAGAAGCTTTACAACGACATAATCTACTTCGTTCAGAACCATGTCAAACCCGTGGCTCCCAGCAACACTTTCCCTTCTTTTCTACATTGCAGTAACAGCAATAACAACACATTACCACAACCACAAGCCTCTCCCATGGTGCAAAGATCGGTGAAGCAGTTTGTGGGGTGCTATTCCAATTCCAATAAAACCAAGCATGCGCGTGCTGTCAACTCTCCCACTAACAGCTCCATAACCATTGTTGAAGAAGAGGCAAGCAGGAACACCTGCAAGACTAAGCTTTTTGGGGTGTCTCTTCAATCCAAGAAAAGGGTGCACCCCGAGTATGGATCTAACACTCTTCAAAGTTCAGAAACAAATAAGGCGCGTTTGGTGTTGGAAAATGATGAATTGTTAGGCTTGAATCTTATGCCCCCTTCAACCTACTATCCCACTTCCAAAGAACTCTTCGGTTGCAGTTACCTGTTGCTGAAGCTGGAAGAGGCTAGTAAGATTGTCCTTGCTGCTGTAAGAAACCCCATGAAAATGCTTGGGGACGTGTTGGAGCTGTGGCTCAATCGCTTATCCTCCAATGGAGGCTTAATAAAACTCTTGCTCAGCATTATAACTGGGGACAAGTTGAGAAAGTATGATCTGAGGTATAGGAGGTATGTTTTCTGCAATGACTTGGTGCCTAGGGTCCCTTTCTATGACAAAACCCTTTTTCTTAAGCATTTTGGTCCTTGCTTCTACTTCAACAGTAGAGACTATACACAAACTTGCTACTTAACCATGTTCAGGGTTTTAGGAAGATTGTGCCTGATAGATGGGAGTTCAAGAATGAGTTGTTTAAGAAAGGAAAGCCTCTCAGCAGCATCAACAAGTACAAGCCATGAACCATCACCACAAGCCTCTCCTATGGTGCAAAGACCAGTGAAGCAGTTTGTGGGGTGCTATTCCGATTCCAACAAAACCAAACATGCGCATGCTGTCAACTCTCCCACTAACAGCTCCATATCTACGAAGAGGGTTGCTGTCCCTCAAATACCCTCACACGTTGATATAAGTTTCTTGTGTCTTACGTTGACGCAATCATTTGTGACTAGCTATCCCAATTTTTTCAGTTGGCAAAGGCTTTGCGTAACGCTGTCTATGGCTTCCAAAGAACTTTTCGGTTGCAGTTACCTGTTGCTGAAGCCAGAAGAGGCTACTATTGCGGATCTTGGAAGCCTCTTGTTCTCTTCTAAGTTAAAGAACAGAAGATTCATCGATTGCCCAGAAGAGGTTGAGGCAAGTGAATTTCGGAAAAGATGGATCCTCTTCACATGTGTTGTGGCACAGATTGTCCTTGCTGCTGCAAGAAACCCCATGAAAATGCTTGGGGACGCGTTGGAGCTGTGGCTCAATCGCTTATCCTCCAATGGAGGCTTAATAAAACTCTTGCTCAACATTATAACTGGAAAGATGATAACACCAGAAAAGTCATCGGCAGCATTTTTATCCGTGGCAGGGCAGCTTGACACACGAGTTGACTTGGACAAAAACATTACGAAGAAAGATGCTAAATACAAAGCTTCCCTCTCAATGATGGCTTCAAAATTATCATATGAAAATGAACAATTCGTTAGTAATGTAGTACGAAATCATTGGGATATGGACTTCTTGGGGTCACACAGCTTCTGGAACGATTACCAAAAACTCTGGTCCACACGAGCAATCATAGTGCAAGATACAAAATCGGAACCCAACTTGATTGTAGTAGCATTCAGGGGTACAGAGGCATTTGATGCGGACCAATGGAGAACTGATGTGGATATCTCGTGGTATGAGTTGCCTAATGTGGGTAGAATACATGGTGGGTTCATGAAAGCTTTGGGTCTTCAGAAGAACAGTGGGTGGCCCAAAGAGATAAAGCAAAGTAGCAGGGTTGGTGAACCTGAACTTCGATATGCGTATTATACAATAAGAGAGAAGCTTAGGGTCATGTTAAAGGCAAACGAAAATGCAAAATTCATATTGACAGGGCATAGTTTAGGAGGAGCCTTGGCCATTCTGTTTGCTGCCGTGCTCACACTGCATGAGGAGGCATGGTTGTTGGACAAGTTAGAAGGAGTTTATACATTTGGGCAACCACGAGTAGGGGACAATAAGTTTGGGGACTTTATGAAAGACAGGTTGATAAAGTATGATGTGAGATATAGGAGGTATGTTTACTGCAATGACTTGGTGCCTAGGGTCCCTTACGATGACAAAACTCTCTTTTTTAAGCACTTTGGTCCTTGCCTCTACTTCAACAGTATGTACCAAGGCCAGGTTCTAGAGGAAGAGCCAAACAGGAACTATTTCTCTTTGTTCTGGGTCATACCCAAGATCCTAAATGCAATTTGGGAGTTTATTAGAGGCTTTCTTATGCCATTTGTAACAGGTAAAGAGTATACACAAACTTGGTTCTTGACCATGTTCAAACTTGTTGGCATAATAATTCCAGGACTACCTGCTCATCTTCCTCCGGATTACGTCAATGTTACTAGATTGGGATCCTTACCTAAATTTCTGGAACTTCAAAGCTCACAAGATTCCAAAGCGAAGTAATGTGAAAGCTTGCGCAAAATTAATAATAATTATACTCAATAATGAAATTTTCAGTGAACAATTACTTTAAAAATGTGTTTTGCT 3294 0.4369 LTIAMALLLDNCESILLSLDTHKSVPAPFLTKTYQLVDDPSTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTPQQHQQVQAMNHHHHQFGLNVPPFFPFHNRLSVSPTHDSDEVVPSWCDSPPRGVRDGTNNNSSSSYNTVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNTFPSFLHCSNSNNNTLPQPQASPMVQRSVKQFVGCYSNSNKTKHARAVNSPTNSSITIVEEEASRNTCKTKLFGVSLQSKKRVHPEYGSNTLQSSETNKARLVLENDELLGLNLMPPSTYYPTSKELFGCSYLLLKLEEASKIVLAAVRNPMKMLGDVLELWLNRLSSNGGLIKLLLSIITGDKLRKYDLRYRRYVFCNDLVPRVPFYDKTLFLKHFGPCFYFNSRDYTQTCYLTMFRVLGRLCLIDGSSRMSCLRKESLSAASTSTSHEPSPQASPMVQRPVKQFVGCYSDSNKTKHAHAVNSPTNSSISTKRVAVPQIPSHVDISFLCLTLTQSFVTSYPNFFSWQRLCVTLSMASKELFGCSYLLLKPEEATIADLGSLLFSSKLKNRRFIDCPEEVEASEFRKRWILFTCVVAQIVLAAARNPMKMLGDALELWLNRLSSNGGLIKLLLNIITGKMITPEKSSAAFLSVAGQLDTRVDLDKNITKKDAKYKASLSMMASKLSYENEQFVSNVVRNHWDMDFLGSHSFWNDYQKLWSTRAIIVQDTKSEPNLIVVAFRGTEAFDADQWRTDVDISWYELPNVGRIHGGFMKALGLQKNSGWPKEIKQSSRVGEPELRYAYYTIREKLRVMLKANENAKFILTGHSLGGALAILFAAVLTLHEEAWLLDKLEGVYTFGQPRVGDNKFGDFMKDRLIKYDVRYRRYVYCNDLVPRVPYDDKTLFFKHFGPCLYFNSMYQGQVLEEEPNRNYFSLFWVIPKILNAIWEFIRGFLMPFVTGKEYTQTWFLTMFKLVGIIIPGLPAHLPPDYVNVTRLGSLPKFLELQSSQDSKAK 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00976 1069 ProSitePatterns HSF-type DNA-binding domain signature. 68 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00976 1069 MobiDBLite consensus disorder prediction 156 186 - -
Pste8g00976 1069 Gene3D - 21 120 IPR036388 -
Pste8g00976 1069 FunFam Heat stress transcription factor B-4 21 119 - -
Pste8g00976 1069 SUPERFAMILY "Winged helix" DNA-binding domain 26 118 IPR036390 -
Pste8g00976 1069 Pfam Lipase (class 3) 792 956 IPR002921 GO:0006629
Pste8g00976 1069 CDD Lipase_3 728 974 - -
Pste8g00976 1069 Gene3D alpha/beta hydrolase 717 993 IPR029058 -
Pste8g00976 1069 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 594 1061 IPR044819 GO:0004806|GO:0006629
Pste8g00976 1069 Pfam HSF-type DNA-binding 29 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00976 1069 SMART hsfneu3 25 118 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00976 1069 SUPERFAMILY alpha/beta-Hydrolases 732 988 IPR029058 -
Pste8g00976 1069 Coils Coil 189 209 - -
Pste8g00976 1069 PRINTS Heat shock factor (HSF) domain signature 29 52 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00976 1069 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pste8g00976 1069 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00976 Pste-Chr8 5102347 5123863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00976 412 460 Acyl Lipid Metabolism Gene Families AT1G56630 57.143 4.68e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pste8g00976 Lipase_3 5.8e-38 CL0028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00976 8 5102347 5123863 Pste8g00976 8 5102347 5123863 ECH