Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00971 AAAAAAACAAAAAGCAAGCATGAGGGGCAAGTGTGGAATTTAAAAGAAACTTCTGCATCGACCACCTCGTCATTTCCATTTTCCATTTCTCGGTTTTGTTCTTAATCCATGGCTTTCCCTCAGCATCACTTCCAACGGCACTACCAAACCCAACAACAACAGCCACAAACCAAACCCTTCAGAAATATGCAAACAATCGATGGTCAGATGTCTCAGCAGTTGGCGTTTTACAACCCAACTGATTTGCAAGATCAGTCCCAGTATCCACCCTATATTCCTCCATTTCATGTTGTTGGGTTTGCTCCGGGTCCGGTTCCCCCTGCTGATGGCAGTGATGGGGGAGTTGATCTGCAATTGCAATGGAATTATGGTTTGGAGCCAGAGAGGAAGAGACTAAAAGAACAGGATTTTTTGGAGAACAATTCTCAGATATCTTCGGTTGATTTCCTTCAACCCCGATCAGTGTCAACTGGGTTGGGCTTGTCACTTGACAACACTCGCCTGACATCCACTGGAGATTCAGCTTTGTTGTCACTCATTGGCGATGATATTGAGCGTGAGCTGCAGCAGCAGGATGCAGAGATAGATAGATTTCTCAAAGTGCAGGAAAATATCATAATACTCAATAGCACGCATTTGTGCCCGTGTGGAGTGGAGGAGCCATTCATTGCTCCTGAGGGTGGCGTCGCTTCGTGCCTTGCTGGTGAACGATTGCGGCAAGCAGTTTTAGAGAAGGTTCAGGCAACACAGGTTCAAAGTGTCTCGCTCATTGAGGACAAAGTTCTTCAGAAACTTCGTGAGAAAGAAGCTGAGGTAGAAAGCATTAACAAGAGGAACATGGAACTTGAAGATCGAATGGAGCAGTTGACTGTGGAAGCTGGTACGTGGCAACAGAGAGCAAGATACAATGAAAATATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCATATGTCCAAAGCAGAGACAGTAAAGAAGGATGTGGTGACAGTGAGGTTGACGATACAGCTTCTTGCTGTAATGGCCGTTCCCTTGATTTTCATCTGCTTTCGAAGGAGAATACTGACATGAAAGAGATGATGACATGCAAGGCTTGCAGAGTCAATGAAGTGACCATGGTTTTGTTACCTTGTAAGCATCTTTGCCTTTGTAAAGATTGTGAAAGTAAGCTTAGTTTCTGCCCTCTATGTCAATCCACCAAATTCATCGGTATGGAGGTCTACATGTAACTGCAAAGTACACTTGTGAAATCTCTAATTTCATGTTACCATGTGTGTCTTTTCTTGTAGCTTGTGTCTCAAAAGGACCATGACACCTTGTAACTAGTTTTTGAGATGCATTTAACCATAATGAATTTCACTTGTTTGAATACGGTGGTGAATTTTGAAAGGATATCTATTAAAACTATCATCCACCGATGCAAGTGGTTGTGAC 1435 0.4334 MAFPQHHFQRHYQTQQQQPQTKPFRNMQTIDGQMSQQLAFYNPTDLQDQSQYPPYIPPFHVVGFAPGPVPPADGSDGGVDLQLQWNYGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTRLTSTGDSALLSLIGDDIERELQQQDAEIDRFLKVQENIIILNSTHLCPCGVEEPFIAPEGGVASCLAGERLRQAVLEKVQATQVQSVSLIEDKVLQKLREKEAEVESINKRNMELEDRMEQLTVEAGTWQQRARYNENMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSLDFHLLSKENTDMKEMMTCKACRVNEVTMVLLPCKHLCLCKDCESKLSFCPLCQSTKFIGMEVYM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00971 373 Coils Coil 222 263 - -
Pste8g00971 373 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 93 371 IPR017066 -
Pste8g00971 373 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 309 373 - -
Pste8g00971 373 ProSiteProfiles Zinc finger RING-type profile. 327 362 IPR001841 -
Pste8g00971 373 CDD mRING-HC-C3HC5_CGRF1-like 326 361 - -
Pste8g00971 373 MobiDBLite consensus disorder prediction 1 23 - -
Pste8g00971 373 Pfam Zinc finger, C3HC4 type (RING finger) 325 363 - -
Pste8g00971 373 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 373 IPR013083 -
Pste8g00971 373 PIRSF SBP1_RNase_bind 1 373 IPR017066 -
Pste8g00971 373 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00971 Pste-Chr8 5060787 5064770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00971 327 363 Miscellaneous Gene Families AT4G39050 45.946 1.16e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00971 8 5060787 5064770 Pste8g00971 8 5060787 5064770 ECH