Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00969 AACAATAAACCATCAACCTTTAACATTCTCTTTCTCTCTCTCTATTTTTTCTCTTTTCAGTTTTGGTTTTGCTTTCAAGTTTCAAGTTCAATGGCTGGTGACATGCATCACCAACCAAATCAATCTCTAGGAAGAGCCTTGCCTCCTCCCGAATCAGAAGAGTTCTCAACGTTGTTCAATCAACTCCTTCACAATTCTCCTCCACTAGGAATGGACCCCAATCATGATTTCACCAACATCAACAACCCTGTTCCTTCCTCTCCCTCAAATTTCCATTTTTCTCAACCCCATCATCACATCTCTGCTTCTGAGGTCACCACCTTCAAACATAACAAAAATCACACCCCTGATTTCACTTCTTCTATTGAGAAGAATGGAGGGGCATCAAAACCAGTCCCGCCACCACGTTCTTCATCAAAAAGGAGTAGAGCTGCAGAGTTCCATAATTTATCTGAAAAGAGAAGGAGGAGTAGGATTAACGAGAAAATGAGAGCCTTGCAGAATTTAATTCCAAACTCTAACAGGACAGACAAAGCTTCAATGCTAGATGAGGCCATAGAATATTTAAAGCAGCTCCAGCTTCAAGTTCAAATGTTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTCTTTGCCAGGAGGAATAAGACCTATGATAATGTCTCAGACTGGGTTGAACTTTGATGGGAGTAGTGGACTTGAGAATTCTACCAGTGCAATTGCATCATCTTCAAATGATGAAAACTTGGTGCGGCATGCTTTTAGTTTTCCCAAGCAATGCAGCATCTCTAATCAGTCCGTTGGTGTACCCTCAGTGACAAACATATCTACTTCGGATAACTCATCCACTTTTCATCCCTCTATTAAGGATGCACTGTACGGCAACATGCCACAAATGTTTATGGATACAACAAAGATTGGAAAACCCCCTTCTCCAGGCGTGTCTTAAACAGCTGGATTTCATCGATGGATAAAAGGATTTTTTATATGGCAAGTCACCTCGTAAAAGGGTAGCTTTGTTCAGGCATTAAAATCTACATTTAAATCGTCTGACTACATGACACCCCATTGGGCTGTTAGTGGTGCAGTTGTAACAGTTTGACACAATCTTTGTGCCGTAGTTGACACTAGCATAAAAGTATACAAGTATTTTATAACTATTGCAAAATGAAGCTAATAAACATTCTGCAACATGTTGCGACTTGTGATAGTTTTGGATGTAATATTCTGGGATGATTAGATATATTCAATGAACTGCGTATCTATG 1269 0.398 NNKPSTFNILFLSLYFFSFQFWFCFQVSSSMAGDMHHQPNQSLGRALPPPESEEFSTLFNQLLHNSPPLGMDPNHDFTNINNPVPSSPSNFHFSQPHHHISASEVTTFKHNKNHTPDFTSSIEKNGGASKPVPPPRSSSKRSRAAEFHNLSEKRRRSRINEKMRALQNLIPNSNRTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMSLPGGIRPMIMSQTGLNFDGSSGLENSTSAIASSSNDENLVRHAFSFPKQCSISNQSVGVPSVTNISTSDNSSTFHPSIKDALYGNMPQMFMDTTKIGKPPSPGVS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00969 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 192 IPR011598 GO:0046983
Pste8g00969 316 MobiDBLite consensus disorder prediction 111 126 - -
Pste8g00969 316 Gene3D - 138 202 IPR036638 GO:0046983
Pste8g00969 316 CDD bHLH_AtPIF_like 143 205 IPR047265 -
Pste8g00969 316 SMART finulus 149 198 IPR011598 GO:0046983
Pste8g00969 316 FunFam Basic helix-loop-helix transcription factor 138 201 - -
Pste8g00969 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 203 IPR036638 GO:0046983
Pste8g00969 316 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 46 289 IPR031066 -
Pste8g00969 316 MobiDBLite consensus disorder prediction 111 154 - -
Pste8g00969 316 Pfam Helix-loop-helix DNA-binding domain 147 193 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00969 Pste-Chr8 5052556 5055849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00969 143 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 66.364 1.25e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste8g00969 HLH 4.3e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00969 8 5052556 5055849 Pste8g00969 8 5052556 5055849 ECH