Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00959 GTTCTGCCACTCATCACCCACTGATCCAAGCTTCCACAAATCATGAGCACATCACTCGGCTCCACTGTGGCGAATACCATGATGTCGTCACAGCCAATTAAAACGTGCCATGTCCCAGGCTCACAGTCACCGGCGGGAGAGTGACAAAGCTTGCAAAACACGATTCTCATTTCCTTCTCACTACAAAACCACACTCCCTCTCGTTCTCTCAACTCTTTCTTCACTCTCCCATTTCCTAAATCCTCCAAAAACCCTAACACTCTCAATTTCAATCTCGCTTATGATTAATGGGAGACCAGCACGCGAATGCTGCACTCCCTCCCGGTTACCGGTTCTACCCTTCCGAAGAGGTTCTTCTCCGCTATTACTTAACCAAGAAGAACGAGAACCGGGAGGGGGGTTTCTACGGTTCTGATTTGATCATGGAGCTGAACCTCTACGATCACAACCCTTTCGAATTACCCGATGCTGCGTGCTTTTCGTACGGTTTCCAAGGGAGGAAGAGGCATTGGTTCTGTTACACGGTTACCAAAGACACCAGACGGCGAAGCAGAAAGGCGAAGGGCGGCTTCTGGCTCCGAAAGGGAAGGGTTCGAGATATTTTCGGTGACGCTGGCGACGTCGTTTTAGGCACCAGGACTCGTTTTGTTTTCTACCAAGGCAACTCCCTCAAAAACGCTTCCAGAACCGATTGGATTTTGTACGAATACTCATTGCTTGACCGCGTCCTGCTCAAAATATGTAAATTTGTGCAGGCTTCATTTGTGCTCTGCCGTGTGGTTAATAAGCCTCATCATAAGAATAGTCCCTCGGAGATTGGTCTCAGTTGTTGCGCCGAAGAGAGCTTCGTGGCGACGGTGCGTCACGTTGGCGTTCAGCATGATGGATGTGTTGGAAATGATGTTGTTGAAGCTAAGTTGTGTGATGATGGCTTTGTTACTAGAGAGAATAAGATTGCTGAGAATTCAATTGGGGTTGGTGGTGAAGATGATGATCCTGCTGCACGGGTTTCAGTTGCTCCTGGAAGTCAGCCGGTTCAGGAAAGGCTTTCTGGACTTCCAAGTGACAGTGCATTGTTTAACGAAGCTGTTACATCTCAGCAACATATGCTTTCTATTCTAGAGGAGGATTTCATAGAATTGAATGATATTGCGTAAATTGATTGGTTTTAAGACATAATGTGAATTCTAATCCTGCTCAAAGGAGTATTTATCACATGAAACAATTGTATTCAGAATGGATTATTGACCTTGCTAAAAAGGGAAGAAATTAAGATATTGAGTAGCTATTGTTCCACTCAAATGAAGATACATACTGTCAGAGGAGTTGAGGCAAATGTCACGGAGTGATCCCGTCGCATATTAAGGTAGTTACTATAGACTTTGTATGTTACACTCTTGAGCTCTGCATGAGGAAATTTTCAGCCGATCTTTGTTTTGGGCATGCAGATTTTCCCTACTGAAGGGCAGTTGGTTCCAGAGGAATAGAGTTAGAGTTAGATATTGGTATTGGTAATTGGAATATACAATTTACTCTAGTATGATATGAGCAACTTCATCGAACTTCATGCTTTCATTGTTCCCTTGAATGAAGGTTCATATTTAGATATCATTAGCATGGGACCATCAGAATTTCCTATCTGCACCTTAGTAGCAAGACCTATACTTTACTGTCTGTGCTACTCTTTTTCCTGTGTTGTTCTAGAGGCGAATCAGATGAATTCCAAATTGTAAGTGTCCCAACATAACGATAATTTATAAATTTCCTTAACCTTCTTTGTACTTTTGTGGTTAAGATGACCGATATATGATCTCTGTTTTTTCTTTATTTGGATTATTTGGATAAAATTCTTCATAAGCAATTATGAGAGAAAAGAATAAGAATAAAATTTTTTCTATAAGTTAAAGCTTGTTTATGCCATAAGCTAATTTTAACTTATGAAGAAACTTATTTCATTTTTTTCTTCTATAATTGCTTATGAAAAAATGATATATGTTTTTCTATCTGGTACCTCCCATATATATGCTGG 2029 0.413 MGDQHANAALPPGYRFYPSEEVLLRYYLTKKNENREGGFYGSDLIMELNLYDHNPFELPDAACFSYGFQGRKRHWFCYTVTKDTRRRSRKAKGGFWLRKGRVRDIFGDAGDVVLGTRTRFVFYQGNSLKNASRTDWILYEYSLLDRVLLKICKFVQASFVLCRVVNKPHHKNSPSEIGLSCCAEESFVATVRHVGVQHDGCVGNDVVEAKLCDDGFVTRENKIAENSIGVGGEDDDPAARVSVAPGSQPVQERLSGLPSDSALFNEAVTSQQHMLSILEEDFIELNDIA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00959 289 Pfam No apical meristem (NAM) protein 11 143 IPR003441 GO:0003677|GO:0006355
Pste8g00959 289 SUPERFAMILY NAC domain 8 167 IPR036093 GO:0003677|GO:0006355
Pste8g00959 289 ProSiteProfiles NAC domain profile. 10 167 IPR003441 GO:0003677|GO:0006355
Pste8g00959 289 Gene3D NAC domain 19 172 IPR036093 GO:0003677|GO:0006355
Pste8g00959 289 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 10 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00959 Pste-Chr8 4995154 4998621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00959 10 234 NAC Transcription Factor Family AT1G32510 29.787 1.30e-21 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste8g00959 NAM 1.1e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00959 8 4995154 4998621 Pste8g00959 8 4995154 4998621 ECH