Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00944 ATGACACAAAAAAGAAGAACAGGGAAATCGGAGAAGTCGAAGAACCAACACCACCGAGAGAAACCGTACCGAGGAATACGGATGAGGAAGTGGGGAAAGTGGGTTGCGGAGATCAGAGAACCGAACAAGAGGTCGAGGATTTGGTTGGGTTCTTACACGACACCCGTTGCCGCCGCACGCGCCTACGACACCGCCGTTTTCTACCTGCGAGGCCCCTCCGCACGCCTTAACTTCCCCGAACTCTTGTTCCAGGACCAGGAGGGAAATGATTCGGTGCAGCACGCCTCAGGGAACATGTCCGCAGATTCCATTCGCAGAAAAGCCACGCAAGTCGGCGCCAGAGTCGACGCTCTCCAAACCGCGCTTCACCACCACGCGTCTTCCACCTCGCTCAAACCCGACTTGAACGAGTTTCCAAAACTCGAAGACCTTCAAGATTGA 441 0.551 MTQKRRTGKSEKSKNQHHREKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDQEGNDSVQHASGNMSADSIRRKATQVGARVDALQTALHHHASSTSLKPDLNEFPKLEDLQD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00944 146 MobiDBLite consensus disorder prediction 89 105 - -
Pste8g00944 146 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Pste8g00944 146 MobiDBLite consensus disorder prediction 89 108 - -
Pste8g00944 146 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Pste8g00944 146 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Pste8g00944 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 8 144 - -
Pste8g00944 146 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Pste8g00944 146 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Pste8g00944 146 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Pste8g00944 146 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Pste8g00944 146 MobiDBLite consensus disorder prediction 1 18 - -
Pste8g00944 146 MobiDBLite consensus disorder prediction 124 146 - -
Pste8g00944 146 MobiDBLite consensus disorder prediction 1 23 - -
Pste8g00944 146 Pfam AP2 domain 23 71 IPR001471 GO:0003700|GO:0006355
Pste8g00944 146 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00944 Pste-Chr8 4913296 4913736 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00944 19 125 AP2-EREBP Transcription Factor Family AT5G67190 68.468 1.48e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste8g00944 AP2 2.1e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00944 8 4913296 4913736 Pste8g00944 8 4913296 4913736 ECH